RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 TXNDC5Q8NBS9 432 aaKnown RBP3.63□□□□□ -1.83
CHD9-204ENST00000561869 SLC7A14Q8TBB6 771 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 THAP3Q8WTV1 239 aaPredicted RBP3.63□□□□□ -1.83
CHD9-204ENST00000561869 ZCCHC14Q8WYQ9 949 aaKnown RBP3.63□□□□□ -1.83
CHD9-204ENST00000561869 DDX1Q92499 740 aaKnown RBP3.63□□□□□ -1.83
CHD9-204ENST00000561869 MBD6Q96DN6 1003 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 SCLYQ96I15 445 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 ZSWIM3Q96MP5 696 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 YTHDC1Q96MU7 727 aaKnown RBP3.63□□□□□ -1.83
CHD9-204ENST00000561869 TMEM209Q96SK2 561 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 CD244Q9BZW8 370 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 OSBPL2Q9H1P3 480 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 CBLCQ9ULV8 474 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 PCDHA9Q9Y5H5 950 aa3.63□□□□□ -1.83
CHD9-204ENST00000561869 FAM90A27PA6NNH2 459 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 MAN2B1O00754 1011 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 KCNQ2O43526 872 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 CKMP06732 381 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 ADRB1P08588 477 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 PYGMP11217 842 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 PDE6AP16499 860 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 KCNA6P17658 529 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 GJA9P57773 515 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 GUCY1A3Q02108 690 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 EFEMP1Q12805 493 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 GPR19Q15760 415 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 RGL3Q3MIN7 710 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 C2orf27AQ580R0 203 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 PHF19Q5T6S3 580 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 CD276Q5ZPR3 534 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 MCTP2Q6DN12 878 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 ARHGAP36Q6ZRI8 547 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.62□□□□□ -1.83
CHD9-204ENST00000561869 MTDHQ86UE4 582 aaKnown RBP3.62□□□□□ -1.83
CHD9-204ENST00000561869 OSTM1Q86WC4 334 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 FBXW5Q969U6 566 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 CLIC6Q96NY7 704 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 IPO9Q96P70 1041 aaKnown RBP3.62□□□□□ -1.83
CHD9-204ENST00000561869 USP40Q9NVE5 1235 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 SRPK3Q9UPE1 567 aa3.62□□□□□ -1.83
CHD9-204ENST00000561869 CDK11AQ9UQ88 783 aaPredicted RBP3.62□□□□□ -1.83
CHD9-204ENST00000561869 CCDC163A0A0D9SF12 145 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.61□□□□□ -1.83
CHD9-204ENST00000561869 MROH6A6NGR9 719 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 ZNF839A8K0R7 811 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 ZNF561-AS1K7EIQ3 104 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 RASGRP1O95267 797 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 IL18BPO95998 194 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 SRGAP2CP0DJJ0 459 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 CNR2P34972 360 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 JAM2P57087 298 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 LACTBP83111 547 aaPredicted RBP3.61□□□□□ -1.83
CHD9-204ENST00000561869 PFKPQ01813 784 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 ZSWIM2Q8NEG5 633 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 RBM15Q96T37 977 aaKnown RBP eCLIP3.61□□□□□ -1.83
CHD9-204ENST00000561869 BDH2Q9BUT1 245 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 MRPL4Q9BYD3 311 aaKnown RBP3.61□□□□□ -1.83
CHD9-204ENST00000561869 SMURF1Q9HCE7 757 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 DLL4Q9NR61 685 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 CROTQ9UKG9 612 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 NUB1Q9Y5A7 615 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 PTCH2Q9Y6C5 1203 aa3.61□□□□□ -1.83
CHD9-204ENST00000561869 CCDC66A2RUB6 948 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 C9orf118A6NHY6 69 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 B4GALT3O60512 393 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 EFCAB14O75071 495 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 CYP7B1O75881 506 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 KLHL18O94889 574 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 KNG1P01042 644 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 C4BPAP04003 597 aaKnown RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 ENO2P09104 434 aaPredicted RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 PTPN1P18031 435 aaKnown RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 NAT1P18440 290 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 KIAA2012Q0VF49 1180 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 DBPQ10586 325 aaPredicted RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 SQSTM1Q13501 440 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 BMS1Q14692 1282 aaKnown RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 SEC23AQ15436 765 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 SKIDA1Q1XH10 827 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 TBC1D10BQ4KMP7 808 aaPredicted RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 UBXN11Q5T124 520 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 PRAMEF18Q5VWM3 479 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 VASNQ6EMK4 673 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 KRTAP5-3Q6L8H2 238 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 FSTL4Q6MZW2 842 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 PKN3Q6P5Z2 889 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 ABHD17CQ6PCB6 329 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 BRAPQ7Z569 592 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 FGD2Q7Z6J4 655 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 PTRH1Q86Y79 214 aaKnown RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 LCORQ96JN0 433 aaPredicted RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 CLUHP3Q96NS8 147 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 WRNIP1Q96S55 665 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 SSBP3Q9BWW4 388 aaPredicted RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 KANSL2Q9H9L4 492 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 NCOA5Q9HCD5 579 aaKnown RBP3.6□□□□□ -1.83
CHD9-204ENST00000561869 TRIM39Q9HCM9 518 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 KCND1Q9NSA2 647 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 CATSPERZQ9NTU4 200 aa3.6□□□□□ -1.83
CHD9-204ENST00000561869 NDOR1Q9UHB4 597 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms