RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 TANGO6Q9C0B7 1094 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 ZHX3Q9H4I2 956 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 MMRN2Q9H8L6 949 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 MAP3K20Q9NYL2 800 aaKnown RBP12.48□□□□□ -0.41
CLPX-204ENST00000559152 COL4A5P29400 1685 aa12.48□□□□□ -0.41
CLPX-204ENST00000559152 WDR46O15213 610 aaKnown RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 CALUO43852 315 aaPredicted RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 TBCAO75347 108 aaKnown RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 ICAM1P05362 532 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 H2AFXP16104 143 aaPredicted RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 PTGER2P43116 358 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 ZNF280AP59817 542 aaPredicted RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 PABPC4Q13310 644 aaKnown RBP eCLIP12.47□□□□□ -0.413e-7■■■■□ 19.6
CLPX-204ENST00000559152 LDHDQ86WU2 507 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 HSD17B14Q9BPX1 270 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 KCTD10Q9H3F6 313 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 OGFRQ9NZT2 677 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 KCND2Q9NZV8 630 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 TRAF3IP3Q9Y228 551 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 PSMD10O75832 226 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 KLK7P49862 253 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 ADAM9Q13443 819 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 RASA3Q14644 834 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 WHAMMP3Q1A5X7 153 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 KNOP1Q1ED39 458 aaKnown RBP12.47□□□□□ -0.41
CLPX-204ENST00000559152 NBPF9Q3BBW0 867 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 FBXO38Q6PIJ6 1188 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 GLIS3Q8NEA6 775 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 RABGGTAQ92696 567 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 UIMC1Q96RL1 719 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 REEP2Q9BRK0 252 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 TBC1D7Q9P0N9 293 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLPX-204ENST00000559152 KIF13BQ9NQT8 1826 aa12.47□□□□□ -0.41
CLPX-204ENST00000559152 NPHP3-ACAD11A0A0J9YXS1 232 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 MEIS1O00470 390 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 PDXKO00764 312 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 GAS7O60861 476 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 RPL13P26373 211 aaKnown RBP12.46□□□□□ -0.41
CLPX-204ENST00000559152 PRELPP51888 382 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
CLPX-204ENST00000559152 BMT2Q1RMZ1 405 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 CCDC122Q5T0U0 273 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 CYP2W1Q8TAV3 490 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 NEK9Q8TD19 979 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 SYN2Q92777 582 aaPredicted RBP12.46□□□□□ -0.41
CLPX-204ENST00000559152 RIT2Q99578 217 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 KIAA1683Q9H0B3 1180 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 BHMT2Q9H2M3 363 aa12.46□□□□□ -0.41
CLPX-204ENST00000559152 FAM207AQ9NSI2 230 aaPredicted RBP12.46□□□□□ -0.41
CLPX-204ENST00000559152 PPP1R1BQ9UD71 204 aaPredicted RBP12.46□□□□□ -0.41
CLPX-204ENST00000559152 REXO2Q9Y3B8 237 aaKnown RBP12.46□□□□□ -0.41
CLPX-204ENST00000559152 PHF20L1A8MW92 1017 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 POTEB2H3BUK9 544 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 CTNND1O60716 968 aaKnown RBP12.46□□□□□ -0.42
CLPX-204ENST00000559152 USO1O60763 962 aaKnown RBP12.46□□□□□ -0.42
CLPX-204ENST00000559152 EPS15P42566 896 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 HSD17B4P51659 736 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 PSMC6P62333 389 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 KIF5AQ12840 1032 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 RSRC2Q7L4I2 434 aaKnown RBP12.46□□□□□ -0.42
CLPX-204ENST00000559152 EPM2AIP1Q7L775 607 aaPredicted RBP12.46□□□□□ -0.42
CLPX-204ENST00000559152 FRMD5Q7Z6J6 570 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 TRIM59Q8IWR1 403 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 NELFCDQ8IXH7 590 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 JAKMIP2Q96AA8 810 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 NACC1Q96RE7 527 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 ZNF577Q9BSK1 485 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 WDR18Q9BV38 432 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 ZNF341Q9BYN7 854 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 OLFML3Q9NRN5 406 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 CCPG1Q9ULG6 757 aa12.46□□□□□ -0.42
CLPX-204ENST00000559152 FDX1P10109 184 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 BCRP11274 1271 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 HERVK_113P62684 666 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 CACNB1Q02641 598 aaPredicted RBP12.45□□□□□ -0.42
CLPX-204ENST00000559152 GHRHRQ02643 423 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 CYP4A11Q02928 519 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 EPHA7Q15375 998 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 STXBP4Q6ZWJ1 553 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 NIPA1Q7RTP0 329 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 LRRN4CLQ8ND94 238 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 HOOK2Q96ED9 719 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 TEKT3Q9BXF9 490 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 DEF6Q9H4E7 631 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 METTL14Q9HCE5 456 aaKnown RBP12.45□□□□□ -0.42
CLPX-204ENST00000559152 CEP72Q9P209 647 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 SEL1LQ9UBV2 794 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 DDX41Q9UJV9 622 aaKnown RBP12.45□□□□□ -0.42
CLPX-204ENST00000559152 GUCA1BQ9UMX6 200 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 A0A0U1RQJ8 604 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 EML1O00423 815 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 SLITRK3O94933 977 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 LCA5LO95447 670 aa12.45□□□□□ -0.42
CLPX-204ENST00000559152 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
CLPX-204ENST00000559152 VAV2P52735 878 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms