RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 WFDC3Q8IUB2 231 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 LINC00116Q8NCU8 138 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 VAV3Q9UKW4 847 aa7.78□□□□□ -1.16
LRRC28-209ENST00000558861 TRBV23-1A0A0A0MS06 115 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 AURKAO14965 403 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 DLX3O60479 287 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 HSD3B2P26439 372 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 ECI1P42126 302 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 KCNJ6P48051 423 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 TEKQ02763 1124 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 C1orf141Q5JVX7 400 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 NSMFQ6X4W1 530 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 ZPBP2Q6X784 338 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 TMEM145Q8NBT3 493 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-209ENST00000558861 KISS1RQ969F8 398 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-209ENST00000558861 MISP3Q96FF7 219 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 CAMKK2Q96RR4 588 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 SLC52A2Q9HAB3 445 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 CYP26B1Q9NR63 512 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 AP5S1Q9NUS5 200 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 MRPS23Q9Y3D9 190 aaKnown RBP7.77□□□□□ -1.17
LRRC28-209ENST00000558861 BACE2Q9Y5Z0 518 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 ZNF521Q96K83 1311 aa7.77□□□□□ -1.17
LRRC28-209ENST00000558861 SCN11AQ9UI33 1791 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 SSU72P8A0A1W2PR75 194 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 TMEM82A0PJX8 343 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 APAF1O14727 1248 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 PPP1R12AO14974 1030 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-209ENST00000558861 PLSCR1O15162 318 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 ASMTLO95671 621 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 GSTM1P09488 218 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 HOXC12P31275 282 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 CD97P48960 835 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 DCTN1Q14203 1278 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 EGFLAMQ63HQ2 1017 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 RNF111Q6ZNA4 994 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 ZNF662Q6ZS27 426 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 MCM10Q7L590 875 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 SPRED2Q7Z698 418 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 DEFB132Q7Z7B7 95 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 C1orf159Q96HA4 380 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 THUMPD2Q9BTF0 503 aaKnown RBP7.76□□□□□ -1.17
LRRC28-209ENST00000558861 DHRS4Q9BTZ2 278 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 CDADC1Q9BWV3 514 aa7.76□□□□□ -1.17
LRRC28-209ENST00000558861 PNNQ9H307 717 aaKnown RBP7.76□□□□□ -1.17
LRRC28-209ENST00000558861 BTAF1O14981 1849 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 HEG1Q9ULI3 1381 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 RGPD3A6NKT7 1758 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-209ENST00000558861 SIPA1L3O60292 1781 aaPredicted RBP7.75□□□□□ -1.17
LRRC28-209ENST00000558861 RGPD4Q7Z3J3 1758 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 KCPQ6ZWJ8 1503 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 BLACEA4D250 179 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 C2orf71A6NGG8 1288 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 SCG5P05408 212 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 THBDP07204 575 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 CD8BP10966 210 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 SPINK2P20155 84 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 RIPK4P57078 832 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 PLEKHG4Q58EX7 1191 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 ZC3H12BQ5HYM0 836 aaKnown RBP7.75□□□□□ -1.17
LRRC28-209ENST00000558861 DENND5AQ6IQ26 1287 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 C16orf86Q6ZW13 317 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 SCUBE1Q8IWY4 988 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 STK11IPQ8N1F8 1099 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 KCTD13Q8WZ19 329 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 COPS5Q92905 334 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 CARS2Q9HA77 564 aaKnown RBP7.75□□□□□ -1.17
LRRC28-209ENST00000558861 GPRC5CQ9NQ84 441 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 ASAP1Q9ULH1 1129 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 SLC5A6Q9Y289 635 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 RRP7AQ9Y3A4 280 aaKnown RBP7.75□□□□□ -1.17
LRRC28-209ENST00000558861 ITGB4P16144 1822 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 MAPK8IP3Q9UPT6 1336 aa7.75□□□□□ -1.17
LRRC28-209ENST00000558861 PAPPAQ13219 1627 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 DLG5Q8TDM6 1919 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 PRNPP04156 253 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 ZNF853P0CG23 659 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 RPL10P27635 214 aaKnown RBP7.74□□□□□ -1.17
LRRC28-209ENST00000558861 NOP2P46087 812 aaKnown RBP7.74□□□□□ -1.17
LRRC28-209ENST00000558861 SEPHS1P49903 392 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 SUMO1P63165 101 aaKnown RBP7.74□□□□□ -1.17
LRRC28-209ENST00000558861 MAP4K2Q12851 820 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 CBX2Q14781 532 aaPredicted RBP7.74□□□□□ -1.17
LRRC28-209ENST00000558861 SLC35F1Q5T1Q4 408 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 RCSD1Q6JBY9 416 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 NFXL1Q6ZNB6 911 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 DTX1Q86Y01 620 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 FAM9BQ8IZU0 186 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 KREMEN2Q8NCW0 462 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 FRS2Q8WU20 508 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 IPO9Q96P70 1041 aaKnown RBP7.74□□□□□ -1.17
LRRC28-209ENST00000558861 TMOD3Q9NYL9 352 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 CCDC39Q9UFE4 941 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 CD2APQ9Y5K6 639 aa7.74□□□□□ -1.17
LRRC28-209ENST00000558861 PALLDQ8WX93 1383 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 KIAA1324LA8MWY0 1029 aaPredicted RBP7.73□□□□□ -1.17
LRRC28-209ENST00000558861 CHL1O00533 1208 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 KCNQ3O43525 872 aa7.73□□□□□ -1.17
LRRC28-209ENST00000558861 SLC39A6Q13433 755 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms