RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 RGS22Q8NE09 1264 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 FRAT1Q92837 279 aaPredicted RBP11.06□□□□□ -0.64
PABPN1-208ENST00000557702 SPATA33Q96N06 139 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 IWS1Q96ST2 819 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 C16orf70Q9BSU1 422 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 RNPEPQ9H4A4 650 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 LIMD1Q9UGP4 676 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 FRYLO94915 3013 aa11.06□□□□□ -0.64
PABPN1-208ENST00000557702 H3BRB1 525 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 APPP05067 770 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 SLC3A2P08195 630 aaKnown RBP11.05□□□□□ -0.64
PABPN1-208ENST00000557702 KCNC3Q14003 757 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 TPRNQ4KMQ1 711 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 PAN2Q504Q3 1202 aaKnown RBP11.05□□□□□ -0.64
PABPN1-208ENST00000557702 CES5AQ6NT32 575 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 ZDHHC14Q8IZN3 488 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 PLCD3Q8N3E9 789 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 GPR161Q8N6U8 529 aaKnown RBP11.05□□□□□ -0.64
PABPN1-208ENST00000557702 RASGRP4Q8TDF6 673 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 MAF1Q9H063 256 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 POMKQ9H5K3 350 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 TUT1Q9H6E5 874 aaKnown RBP11.05□□□□□ -0.64
PABPN1-208ENST00000557702 PCDHB12Q9Y5F1 795 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 GPR179Q6PRD1 2367 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 USP24Q9UPU5 2620 aa11.05□□□□□ -0.64
PABPN1-208ENST00000557702 TSPY2A6NKD2 308 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 STK25O00506 426 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ANP32CO43423 234 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 EIF3JO75822 258 aaKnown RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 CHRNA1P02708 482 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ADRB1P08588 477 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ARP10275 920 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ATP5JP18859 108 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 GNAT2P19087 354 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ERVFC1P60507 584 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ITIH3Q06033 890 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 HSDL1Q3SXM5 330 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 MYSM1Q5VVJ2 828 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 LLGL2Q6P1M3 1020 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 TDRD5Q8NAT2 981 aaKnown RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 RIN2Q8WYP3 895 aaPredicted RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 TAAR1Q96RJ0 339 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 RMDN3Q96TC7 470 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 BCL11AQ9H165 835 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 ADAM7Q9H2U9 754 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 EHMT1Q9H9B1 1298 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 EPB41L4AQ9HCS5 686 aaPredicted RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 SH2B1Q9NRF2 756 aaPredicted RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 RNF216Q9NWF9 866 aaPredicted RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 FBXL21Q9UKT6 434 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 CDV3Q9UKY7 258 aaKnown RBP11.04□□□□□ -0.64
PABPN1-208ENST00000557702 WDR19Q8NEZ3 1342 aa11.04□□□□□ -0.64
PABPN1-208ENST00000557702 DCDC2BA2VCK2 349 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 PRR5-ARHGAP8B1AHC4 643 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 STAG3L1P0CL83 205 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 ARHGAP8P85298 464 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 CELF3Q5SZQ8 465 aaKnown RBP11.03□□□□□ -0.64
PABPN1-208ENST00000557702 SPOUT1Q5T280 376 aaKnown RBP11.03□□□□□ -0.64
PABPN1-208ENST00000557702 ARHGEF16Q5VV41 709 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 KCNV1Q6PIU1 500 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 NPAS4Q8IUM7 802 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 SYTL5Q8TDW5 730 aaPredicted RBP11.03□□□□□ -0.64
PABPN1-208ENST00000557702 RTKNQ9BST9 563 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 ERVK-5Q9HDB9 667 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 GPCPD1Q9NPB8 672 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 AAASQ9NRG9 546 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 IL17RBQ9NRM6 502 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 SETD4Q9NVD3 440 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 CDH22Q9UJ99 828 aa11.03□□□□□ -0.64
PABPN1-208ENST00000557702 FRMPD2Q68DX3 1309 aaPredicted RBP11.03□□□□□ -0.64
PABPN1-208ENST00000557702 MYH7BA7E2Y1 1941 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 PATL2C9JE40 543 aaKnown RBP11.02□□□□□ -0.65
PABPN1-208ENST00000557702 FSCN2O14926 492 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 SORBS3O60504 671 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 NMT2O60551 498 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 FGF18O76093 207 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 MTHFRP42898 656 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 LPIN1Q14693 890 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 USH1GQ495M9 461 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 CEP85Q6P2H3 762 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 IFNL3Q8IZI9 196 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 SIX5Q8N196 739 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 CRIPAKQ8N1N5 446 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 TBC1D5Q92609 795 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 CASP10Q92851 521 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 KIF1BPQ96EK5 621 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 MLXIPQ9HAP2 919 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 TMEM260Q9NX78 707 aa11.02□□□□□ -0.65
PABPN1-208ENST00000557702 GPAA1O43292 621 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 KINO60870 393 aaKnown RBP11.01□□□□□ -0.65
PABPN1-208ENST00000557702 GGPS1O95749 300 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 NR3C2P08235 984 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 SP9P0CG40 484 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 EIF2AK2P19525 551 aaKnown RBP11.01□□□□□ -0.65
PABPN1-208ENST00000557702 RFX1P22670 979 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 ARHGAP4P98171 946 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 DMWDQ09019 674 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
PABPN1-208ENST00000557702 PLPP4Q5VZY2 271 aa11.01□□□□□ -0.65
PABPN1-208ENST00000557702 THNSL1Q8IYQ7 743 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms