RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 DVL2O14641 736 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ERC2O15083 957 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 AMY2AP04746 511 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ZBTB48P10074 688 aaPredicted RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 GNAT1P11488 350 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 COL6A2P12110 1019 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 AMY2BP19961 511 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 LSP1P33241 339 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 GPR3P46089 330 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 KRT85P78386 507 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 PICALMQ13492 652 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 GTF2H3Q13889 308 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 GALEQ14376 348 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 GBX1Q14549 363 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 DHX8Q14562 1220 aaKnown RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ZNF174Q15697 407 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 LONRF3Q496Y0 759 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 COBLL1Q53SF7 1204 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 EFCAB2Q5VUJ9 269 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 OGFOD3Q6PK18 319 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ZPBP2Q6X784 338 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ZNF765Q7L2R6 523 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 APBB1IPQ7Z5R6 666 aaPredicted RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 PTRH1Q86Y79 214 aaKnown RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 DZIP1LQ8IYY4 767 aaKnown RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 PJA1Q8NG27 643 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 TGFBRAP1Q8WUH2 860 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ASIC4Q96FT7 647 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 TEKT5Q96M29 485 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 AIFM3Q96NN9 605 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 ELF4Q99607 663 aaPredicted RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 PCIF1Q9H4Z3 704 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 CCM2LQ9NUG4 571 aaPredicted RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 SAP30BPQ9UHR5 308 aaKnown RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 NOC2LQ9Y3T9 749 aaKnown RBP4.02□□□□□ -1.77
TRAV28-201ENST00000557548 SPO11Q9Y5K1 396 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 U3KQE9 123 aa4.02□□□□□ -1.77
TRAV28-201ENST00000557548 TMEM82A0PJX8 343 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 KLHL33A6NCF5 533 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 TRIM75PA6NK02 468 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 FAM170BA6NMN3 283 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 H3BS24 57 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 APAF1O14727 1248 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 DHX15O43143 795 aaKnown RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 KDM1AO60341 852 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 ZRANB2O95218 330 aaKnown RBP eCLIP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 MED26O95402 600 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 TBC1D8O95759 1140 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 FOSP01100 380 aaPredicted RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 FPR2P25090 351 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 LTKP29376 864 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 KIF11P52732 1056 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 PHC1P78364 1004 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 SMAD3P84022 425 aaKnown RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 PDCD1Q15116 288 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 GPR19Q15760 415 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 SMAD2Q15796 467 aaKnown RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 CYP27C1Q4G0S4 372 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 IFIT1BQ5T764 474 aaKnown RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 ANGEL2Q5VTE6 544 aaKnown RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 CYP2R1Q6VVX0 501 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 RNF111Q6ZNA4 994 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 ARHGAP36Q6ZRI8 547 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 ARHGAP27Q6ZUM4 889 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 ZAR1Q86SH2 424 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 SPICE1Q8N0Z3 855 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 SHISA5Q8N114 240 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 FAM181AQ8N9Y4 354 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 FBXO41Q8TF61 875 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 LMBR1Q8WVP7 490 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 DPF3Q92784 378 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 NUP88Q99567 741 aaPredicted RBP4.01□□□□□ -1.77
TRAV28-201ENST00000557548 PRDM16Q9HAZ2 1276 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 NMRK2Q9NPI5 230 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 ZSWIM5Q9P217 1185 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 TAGLN3Q9UI15 199 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 DUSP13Q9UII6 198 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 INTUQ9ULD6 942 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 DAAM1Q9Y4D1 1078 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 PCDHA11Q9Y5I1 949 aa4.01□□□□□ -1.77
TRAV28-201ENST00000557548 TCRBV5S4A2TA0A5A2 114 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 HMX2A2RU54 273 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 WTIPA6NIX2 430 aaPredicted RBP4□□□□□ -1.77
TRAV28-201ENST00000557548 SCDO00767 359 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 NKRFO15226 690 aaKnown RBP eCLIP4□□□□□ -1.77
TRAV28-201ENST00000557548 AP1G1O43747 822 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 NPHS1O60500 1241 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 HIP1RO75146 1068 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 MYBP10242 640 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 HSPA6P17066 643 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 VCAM1P19320 739 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 PAX3P23760 479 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 PTX3P26022 381 aaPredicted RBP4□□□□□ -1.77
TRAV28-201ENST00000557548 GTF2A2P52657 109 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 RBM10P98175 930 aaKnown RBP4□□□□□ -1.77
TRAV28-201ENST00000557548 ZNF267Q14586 743 aaPredicted RBP4□□□□□ -1.77
TRAV28-201ENST00000557548 SAFBQ15424 915 aaKnown RBP eCLIP4□□□□□ -1.77
TRAV28-201ENST00000557548 NKPD1Q17RQ9 610 aa4□□□□□ -1.77
TRAV28-201ENST00000557548 GAB4Q2WGN9 574 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 318.3 ms