RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 CTAGE1Q96RT6 745 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 GPR20Q99678 358 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 TUT1Q9H6E5 874 aaKnown RBP16.02■□□□□ 0.16
SLIRP-207ENST00000556831 AZI2Q9H6S1 392 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 SLC9A2Q9UBY0 812 aa16.02■□□□□ 0.16
SLIRP-207ENST00000556831 SCN5AQ14524 2016 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 CCDC194A0A1B0GVG4 234 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 ATP9AO75110 1047 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 GNAT1P11488 350 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 TCF7P36402 384 aaPredicted RBP16.01■□□□□ 0.15
SLIRP-207ENST00000556831 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 KRT25Q7Z3Z0 450 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 SESTD1Q86VW0 696 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 DAGLBQ8NCG7 672 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 CYP2W1Q8TAV3 490 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 GLG1Q92896 1179 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 TNPO1Q92973 898 aaKnown RBP16.01■□□□□ 0.15
SLIRP-207ENST00000556831 VWCEQ96DN2 955 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 ZNF577Q9BSK1 485 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 WNT8AQ9H1J5 351 aa16.01■□□□□ 0.15
SLIRP-207ENST00000556831 SH2B1Q9NRF2 756 aaPredicted RBP16.01■□□□□ 0.15
SLIRP-207ENST00000556831 NFASCO94856 1347 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 C17orf102A2RUQ5 167 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 MEIS1O00470 390 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 LARGE1O95461 756 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 CYP3A4P08684 503 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 ACRP10323 421 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 NONOQ15233 471 aaKnown RBP eCLIP16■□□□□ 0.15
SLIRP-207ENST00000556831 PRR16Q569H4 304 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 PSRC1Q6PGN9 363 aaPredicted RBP16■□□□□ 0.15
SLIRP-207ENST00000556831 AIFM3Q96NN9 605 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 MTIF3Q9H2K0 278 aaKnown RBP16■□□□□ 0.15
SLIRP-207ENST00000556831 AGO4Q9HCK5 861 aaKnown RBP16■□□□□ 0.15
SLIRP-207ENST00000556831 HDAC6Q9UBN7 1215 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 GTF2IRD1Q9UHL9 959 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 KCNJ14Q9UNX9 436 aa16■□□□□ 0.15
SLIRP-207ENST00000556831 FAM86B1E9PN63 330 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 DDX39AO00148 427 aaKnown RBP15.99■□□□□ 0.15
SLIRP-207ENST00000556831 FAM86B2P0C5J1 330 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 ARP10275 920 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 CSF2RAP15509 400 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 USP11P51784 963 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 CCL23P55773 120 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 CCDC83Q8IWF9 413 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 CAGE1Q8TC20 777 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 TBCKQ8TEA7 893 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 SCLYQ96I15 445 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 RNPC3Q96LT9 517 aaKnown RBP15.99■□□□□ 0.15
SLIRP-207ENST00000556831 UIMC1Q96RL1 719 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 C16orf70Q9BSU1 422 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 NOC4LQ9BVI4 516 aaKnown RBP15.99■□□□□ 0.15
SLIRP-207ENST00000556831 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 ERAP1Q9NZ08 941 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 CDH23Q9H251 3354 aa15.99■□□□□ 0.15
SLIRP-207ENST00000556831 HAS3O00219 553 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 IPO5O00410 1097 aaKnown RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 PITPNM1O00562 1244 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 BACH1O14867 736 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 CTDNEP1O95476 244 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 KRT2P35908 639 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 ZNF200P98182 395 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 SAFBQ15424 915 aaKnown RBP eCLIP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 GDF6Q6KF10 455 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 TRIM50Q86XT4 487 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 RPUSD2Q8IZ73 545 aaKnown RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 FAM184AQ8NB25 1140 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 NSUN7Q8NE18 718 aaKnown RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 WNT8BQ93098 351 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 NAP1L4Q99733 375 aaKnown RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 LLPHQ9BRT6 129 aaKnown RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 PHF20Q9BVI0 1012 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 SMARCAD1Q9H4L7 1026 aa15.98■□□□□ 0.15
SLIRP-207ENST00000556831 TRIP12Q14669 1992 aaPredicted RBP15.98■□□□□ 0.15
SLIRP-207ENST00000556831 EDIL3O43854 480 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 SMIM10L2AP0DMW4 78 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 SMIM10L2BP0DMW5 78 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 FOSBP53539 338 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 ACTR2P61160 394 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 HMGN5P82970 282 aaKnown RBP15.97■□□□□ 0.15
SLIRP-207ENST00000556831 FAM160B1Q5W0V3 765 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 MIS18BP1Q6P0N0 1132 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 AFAP1L1Q8TED9 768 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 DHX38Q92620 1227 aaKnown RBP15.97■□□□□ 0.15
SLIRP-207ENST00000556831 ATP6V0A1Q93050 837 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.97■□□□□ 0.156e-7■■■□□ 18.5
SLIRP-207ENST00000556831 IL23AQ9NPF7 189 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 TRPC6Q9Y210 931 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 KIF3AQ9Y496 699 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 SAMM50Q9Y512 469 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 TANC1Q9C0D5 1861 aa15.97■□□□□ 0.15
SLIRP-207ENST00000556831 EMSYQ7Z589 1322 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 IGLV3-22A0A075B6J6 115 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 JAK2O60674 1132 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 PFKMP08237 780 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 MARK3P27448 753 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 CIITAP33076 1130 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 RFC2P35250 354 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 MCM2P49736 904 aa15.96■□□□□ 0.15
SLIRP-207ENST00000556831 KRT76Q01546 638 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms