RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PREPLQ4J6C6 727 aaPredicted RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 STRIP1Q5VSL9 837 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 STYK1Q6J9G0 422 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 MMS22LQ6ZRQ5 1243 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 RELL1Q8IUW5 271 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 RBM12BQ8IXT5 1001 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 DRAXINQ8NBI3 349 aaPredicted RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 COA7Q96BR5 231 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 CEP63Q96MT8 703 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 TRIM4Q9C037 500 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 JMJD4Q9H9V9 463 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 VAT1LQ9HCJ6 419 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 TMEM260Q9NX78 707 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 RRP15Q9Y3B9 282 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 BRCA1P38398 1863 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 FER1L6Q2WGJ9 1857 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 YDJCA8MPS7 323 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 CTIFO43310 598 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 GTPBP6O43824 516 aaPredicted RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 KLRC4O43908 158 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 COBLO75128 1261 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 RPSAP08865 295 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 HMGB2P26583 209 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 PBX1P40424 430 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 STX17P56962 302 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 ASPRV1Q53RT3 343 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 TTBK2Q6IQ55 1244 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 DTHD1Q6ZMT9 781 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 LEKR1Q6ZMV7 388 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 SIAH1Q8IUQ4 282 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 TC2NQ8N9U0 490 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 TBCKQ8TEA7 893 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 PPM1EQ8WY54 764 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 JDP2Q8WYK2 163 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 MIEF2Q96C03 454 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 MTMR8Q96EF0 704 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 MMTAG2Q9BU76 263 aaKnown RBP5.61□□□□□ -1.51
TMEM260-210ENST00000556422 IDI2Q9BXS1 227 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 CCSER1Q9C0I3 900 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 KBTBD4Q9NVX7 518 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 DACH1Q9UI36 760 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 PRELID1Q9Y255 219 aa5.61□□□□□ -1.51
TMEM260-210ENST00000556422 LAD1O00515 517 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 TEX33O43247 280 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CCNT1O60563 726 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CLK2P49760 499 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 FKBP1AP62942 108 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 NSUN2Q08J23 767 aaKnown RBP eCLIP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 DHX8Q14562 1220 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 NONOQ15233 471 aaKnown RBP eCLIP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 AOC3Q16853 763 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 TPD52L1Q16890 204 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 LETM2Q2VYF4 491 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SPATA1Q5VX52 437 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PPP4R4Q6NUP7 873 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 KRT25Q7Z3Z0 450 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 DEFB132Q7Z7B7 95 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 NEK8Q86SG6 692 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 KIAA1328Q86T90 577 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 POTEDQ86YR6 584 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ADGRF4Q8IZF3 695 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 REXO1Q8N1G1 1221 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 GBP7Q8N8V2 638 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ATP11CQ8NB49 1132 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ERP27Q96DN0 273 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 DDX27Q96GQ7 796 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PPP1R13BQ96KQ4 1090 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CCDC114Q96M63 670 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ZMAT2Q96NC0 199 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 MRIQ9BWK5 157 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ATP8A1Q9Y2Q0 1164 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 GDAQ9Y2T3 454 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SCINQ9Y6U3 715 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 RBBP6Q7Z6E9 1792 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SLC37A4O43826 429 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 LDHAP00338 332 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 RFX1P22670 979 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 GNA11P29992 359 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PIK3CAP42336 1068 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 TCP10Q12799 353 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 USP4Q13107 963 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 MPP3Q13368 585 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 EZH2Q15910 746 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SLC15A2Q16348 729 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 TBC1D25Q3MII6 688 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 TTC39BQ5VTQ0 682 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SFMBT2Q5VUG0 894 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CCDC89Q8N998 374 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CCDC12Q8WUD4 166 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 MTMR9Q96QG7 549 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 CAMKK2Q96RR4 588 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 PPCSQ9HAB8 311 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 C6orf50Q9HD87 102 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ADD3Q9UEY8 706 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 SEC63Q9UGP8 760 aaKnown RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 FBXL5Q9UKA1 691 aa5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ARIH1Q9Y4X5 557 aaPredicted RBP5.6□□□□□ -1.51
TMEM260-210ENST00000556422 ATRNL1Q5VV63 1379 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms