RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 CENPPQ6IPU0 288 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 ARMCX5Q6P1M9 558 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 XRRA1Q6P2D8 792 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 GPBP1Q86WP2 473 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 IRF2BP1Q8IU81 584 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 CCDC65Q8IXS2 484 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 TAAR1Q96RJ0 339 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 ZIC5Q96T25 663 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 DUSP9Q99956 384 aaKnown RBP16.39■□□□□ 0.21
VPS33B-205ENST00000556096 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 SLC39A2Q9NP94 309 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 JADE2Q9NQC1 790 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 PANK4Q9NVE7 773 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 RIPK3Q9Y572 518 aa16.39■□□□□ 0.21
VPS33B-205ENST00000556096 KCNJ18B7U540 433 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 EYA4O95677 639 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 SSBP05455 408 aaKnown RBP eCLIP16.38■□□□□ 0.21
VPS33B-205ENST00000556096 SKILP12757 684 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 EEF1GP26641 437 aaKnown RBP16.38■□□□□ 0.21
VPS33B-205ENST00000556096 PBX1P40424 430 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 COASYQ13057 564 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 KCNJ12Q14500 433 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 TMEM132BQ14DG7 1078 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 KRT31Q15323 416 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 EPHA7Q15375 998 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 SNRNP48Q6IEG0 339 aaKnown RBP16.38■□□□□ 0.21
VPS33B-205ENST00000556096 SLC30A10Q6XR72 485 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 TRIM47Q96LD4 638 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 TEX13BQ9BXU2 312 aa16.38■□□□□ 0.21
VPS33B-205ENST00000556096 FRMD3A2A2Y4 597 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 UNCXA6NJT0 531 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 RASSF10A6NK89 507 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
VPS33B-205ENST00000556096 IRF6O14896 467 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 SLITRK3O94933 977 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 PSMC6P62333 389 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 MRPS9P82933 396 aaKnown RBP16.37■□□□□ 0.21
VPS33B-205ENST00000556096 PPIL2Q13356 520 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 PGM5Q15124 567 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 ARSHQ5FYA8 562 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 ANKRD40Q6AI12 368 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 NSMFQ6X4W1 530 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 IL31RAQ8NI17 732 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 NEK9Q8TD19 979 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 CAPNS2Q96L46 248 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 PDCD2LQ9BRP1 358 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 SRRTQ9BXP5 876 aaKnown RBP16.37■□□□□ 0.21
VPS33B-205ENST00000556096 PXMP2Q9NR77 195 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 KCNH7Q9NS40 1196 aa16.37■□□□□ 0.21
VPS33B-205ENST00000556096 CXCL11O14625 94 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 TEX33O43247 280 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 NRDCO43847 1150 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 VEGFBP49765 207 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 COPB1P53618 953 aaKnown RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 BAATQ14032 418 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 CSGALNACT2Q8N6G5 542 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 HPS3Q969F9 1004 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 RMDN3Q96TC7 470 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 UNC45AQ9H3U1 944 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 RGL1Q9NZL6 768 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 FAM155AB1AL88 458 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 SLC10A3P09131 477 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 CYP4A11Q02928 519 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 FAM26FQ5R3K3 315 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 ARHGEF16Q5VV41 709 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 FAM114A1Q8IWE2 563 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 PROCA1Q8NCQ7 364 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 CCDC112Q8NEF3 446 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 DYDC2Q96IM9 177 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 ZFP91Q96JP5 570 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 SEMA6BQ9H3T3 888 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 AGO4Q9HCK5 861 aaKnown RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 KCND1Q9NSA2 647 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 MAGEC2Q9UBF1 373 aaPredicted RBP16.36■□□□□ 0.21
VPS33B-205ENST00000556096 KCNH4Q9UQ05 1017 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 PCDHA2Q9Y5H9 948 aa16.36■□□□□ 0.21
VPS33B-205ENST00000556096 ITIH6Q6UXX5 1313 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 CEP350Q5VT06 3117 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 A0A0G2JLL6 359 aaPredicted RBP16.35■□□□□ 0.21
VPS33B-205ENST00000556096 N4BP3O15049 544 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 DHX15O43143 795 aaKnown RBP16.35■□□□□ 0.21
VPS33B-205ENST00000556096 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
VPS33B-205ENST00000556096 KCNJ6P48051 423 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 LRRC63Q05C16 580 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 PABPC4Q13310 644 aaKnown RBP eCLIP16.35■□□□□ 0.21
VPS33B-205ENST00000556096 GIT2Q14161 759 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 PRRT2Q7Z6L0 340 aaPredicted RBP16.35■□□□□ 0.21
VPS33B-205ENST00000556096 MYOCDQ8IZQ8 938 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 C17orf53Q8N3J3 647 aaPredicted RBP16.35■□□□□ 0.21
VPS33B-205ENST00000556096 TMX1Q9H3N1 280 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 ACAD9Q9H845 621 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 TBC1D22BQ9NU19 505 aa16.35■□□□□ 0.21
VPS33B-205ENST00000556096 CHMP2AO43633 222 aa16.34■□□□□ 0.21
VPS33B-205ENST00000556096 KIF20AO95235 890 aa16.34■□□□□ 0.21
VPS33B-205ENST00000556096 FGFR1OPO95684 399 aaKnown RBP16.34■□□□□ 0.21
VPS33B-205ENST00000556096 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
VPS33B-205ENST00000556096 MTMR1Q13613 665 aa16.34■□□□□ 0.21
VPS33B-205ENST00000556096 CTTNQ14247 550 aaKnown RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms