RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TRIM59Q8IWR1 403 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 CLIP3Q96DZ5 547 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 KCND1Q9NSA2 647 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 ASH2LQ9UBL3 628 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 ZFP69BQ9UJL9 534 aa5.67□□□□□ -1.5
SRP54-207ENST00000555535 A0A1W2PQH9 124 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 FOXN1O15353 648 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 CKMP06732 381 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 ACBD5Q5T8D3 534 aaPredicted RBP5.66□□□□□ -1.5
SRP54-207ENST00000555535 CHAMP1Q96JM3 812 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 SCYL1Q96KG9 808 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 TTPALQ9BTX7 342 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 APEX2Q9UBZ4 518 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 NUB1Q9Y5A7 615 aa5.66□□□□□ -1.5
SRP54-207ENST00000555535 CYP27B1O15528 508 aa5.65□□□□□ -1.5
SRP54-207ENST00000555535 ENO2P09104 434 aaPredicted RBP5.65□□□□□ -1.5
SRP54-207ENST00000555535 POLD1P28340 1107 aa5.65□□□□□ -1.5
SRP54-207ENST00000555535 EIF6P56537 245 aaKnown RBP5.65□□□□□ -1.5
SRP54-207ENST00000555535 SKIDA1Q1XH10 827 aa5.65□□□□□ -1.5
SRP54-207ENST00000555535 ZNF808Q8N4W9 903 aaPredicted RBP5.65□□□□□ -1.5
SRP54-207ENST00000555535 SPATA32Q96LK8 384 aa5.65□□□□□ -1.5
SRP54-207ENST00000555535 SLC2A4RGQ9NR83 387 aa5.65□□□□□ -1.5
SRP54-207ENST00000555535 NR2E1Q9Y466 385 aa5.65□□□□□ -1.5
SRP54-207ENST00000555535 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
SRP54-207ENST00000555535 RHOBTB3O94955 611 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 CPP00450 1065 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 ZNF888P0CJ79 500 aaPredicted RBP5.64□□□□□ -1.51
SRP54-207ENST00000555535 HOXC12P31275 282 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 ADRA1BP35368 520 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 LTBRP36941 435 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 RNF151Q2KHN1 245 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 KIAA1211LQ6NV74 962 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 CCDC103Q8IW40 242 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
SRP54-207ENST00000555535 STPG3Q8N7X2 389 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 CCDC140Q96MF4 163 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 PLA2G12BQ9BX93 195 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 TLR9Q9NR96 1032 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 CLDND1Q9NY35 253 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 RBPJLQ9UBG7 517 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 GIT1Q9Y2X7 761 aa5.64□□□□□ -1.51
SRP54-207ENST00000555535 KRTAP10-11P60412 298 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 COL10A1Q03692 680 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 DUSP8Q13202 625 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 LAIR1Q6GTX8 287 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 ADGRE4PQ86SQ3 457 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 TMPRSS6Q8IU80 811 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 RCBTB1Q8NDN9 531 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 DPYSL5Q9BPU6 564 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 PDGFDQ9GZP0 370 aaPredicted RBP5.63□□□□□ -1.51
SRP54-207ENST00000555535 C12orf65Q9H3J6 166 aaKnown RBP5.63□□□□□ -1.51
SRP54-207ENST00000555535 NELFAQ9H3P2 528 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 PTPN22Q9Y2R2 807 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 PCDHA2Q9Y5H9 948 aa5.63□□□□□ -1.51
SRP54-207ENST00000555535 SCG5P05408 212 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 GLRBP48167 497 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 GIPRP48546 466 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 NFYCQ13952 458 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 MRPL58Q14197 206 aaKnown RBP5.62□□□□□ -1.51
SRP54-207ENST00000555535 PHF19Q5T6S3 580 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 VHLLQ6RSH7 139 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 DPP8Q6V1X1 898 aaPredicted RBP5.62□□□□□ -1.51
SRP54-207ENST00000555535 MRGPRX3Q96LB0 322 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 SLC6A20Q9NP91 592 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 CEP72Q9P209 647 aa5.62□□□□□ -1.51
SRP54-207ENST00000555535 PUF60Q9UHX1 559 aaKnown RBP5.62□□□□□ -1.51
SRP54-207ENST00000555535 FAHP16930 419 aa5.61□□□□□ -1.51
SRP54-207ENST00000555535 KRT4P19013 534 aa5.61□□□□□ -1.51
SRP54-207ENST00000555535 CCDC81Q6ZN84 652 aa5.61□□□□□ -1.51
SRP54-207ENST00000555535 MICAL1Q8TDZ2 1067 aa5.61□□□□□ -1.51
SRP54-207ENST00000555535 PTGFRNQ9P2B2 879 aa5.61□□□□□ -1.51
SRP54-207ENST00000555535 FBXL7Q9UJT9 491 aa5.61□□□□□ -1.51
SRP54-207ENST00000555535 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 MSX2P35548 267 aaPredicted RBP5.6□□□□□ -1.51
SRP54-207ENST00000555535 PFKPQ01813 784 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 CYP4F3Q08477 520 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 FOXL1Q12952 345 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 TOP3AQ13472 1001 aaPredicted RBP5.6□□□□□ -1.51
SRP54-207ENST00000555535 Q6ZPA2 131 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 SGMS1Q86VZ5 419 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 PPP1R14AQ96A00 147 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 ZNF764Q96H86 408 aaPredicted RBP5.6□□□□□ -1.51
SRP54-207ENST00000555535 PLA2G3Q9NZ20 509 aa5.6□□□□□ -1.51
SRP54-207ENST00000555535 ZNF839A8K0R7 811 aa5.59□□□□□ -1.51
SRP54-207ENST00000555535 ARHGAP6O43182 974 aa5.59□□□□□ -1.51
SRP54-207ENST00000555535 SNRPB2P08579 225 aaKnown RBP5.59□□□□□ -1.51
SRP54-207ENST00000555535 ETV4P43268 484 aa5.59□□□□□ -1.51
SRP54-207ENST00000555535 NCAPHQ15003 741 aa5.59□□□□□ -1.51
SRP54-207ENST00000555535 PAN2Q504Q3 1202 aaKnown RBP5.59□□□□□ -1.51
SRP54-207ENST00000555535 ZNF326Q5BKZ1 582 aaKnown RBP5.59□□□□□ -1.51
SRP54-207ENST00000555535 ZKSCAN2Q63HK3 967 aa5.59□□□□□ -1.51
SRP54-207ENST00000555535 PPIL6Q8IXY8 311 aa5.59□□□□□ -1.51
SRP54-207ENST00000555535 NUDT3O95989 172 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 ITGAVP06756 1048 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 ZNF76P36508 570 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 ECI1P42126 302 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 CASP7P55210 303 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 GRIN1Q05586 938 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 PPP2R5EQ16537 467 aa5.58□□□□□ -1.52
SRP54-207ENST00000555535 CD276Q5ZPR3 534 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms