RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.4□□□□□ -0.58
NEK9-205ENST00000555405 SLC9A2Q9UBY0 812 aa11.4□□□□□ -0.58
NEK9-205ENST00000555405 STRNO43815 780 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 PLA2G4BP0C869 781 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 NAALADL2Q58DX5 795 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 PLA2G4FQ68DD2 849 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 C17orf99Q6UX52 265 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 C11orf57Q6ZUT1 292 aaPredicted RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 TRMT44Q8IYL2 757 aaKnown RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 CD99L2Q8TCZ2 262 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 IWS1Q96ST2 819 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 MORF4L1Q9UBU8 362 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 GABRQQ9UN88 632 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 ASB14A6NK59 587 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 TBX3O15119 743 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 DYNC1LI2O43237 492 aaPredicted RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 CCNE2O96020 404 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 BCRP11274 1271 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 FLT3LGP49771 235 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 IRX5P78411 483 aaPredicted RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 LRRC41Q15345 812 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 XKR9Q5GH70 373 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 KANK3Q6NY19 840 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 INPP4AQ96PE3 977 aaPredicted RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 TBC1D22BQ9NU19 505 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 SLC5A4Q9NY91 659 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 VAV3Q9UKW4 847 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 RPTORQ8N122 1335 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 ARHGEF35A5YM69 484 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 USO1O60763 962 aaKnown RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 SLITRK3O94933 977 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 ELNP15502 786 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 UBA1P22314 1058 aaKnown RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 ACTR2P61160 394 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 IGBP1P78318 339 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 SP3Q02447 781 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 PDXDC2PQ6P474 469 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 ZNF668Q96K58 619 aaPredicted RBP11.39□□□□□ -0.59
NEK9-205ENST00000555405 SPATA33Q96N06 139 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 MTRQ99707 1265 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 SLC39A2Q9NP94 309 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 SLC45A1Q9Y2W3 748 aa11.39□□□□□ -0.59
NEK9-205ENST00000555405 PTPRFP10586 1907 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.38□□□□□ -0.59
NEK9-205ENST00000555405 MYMKA6NI61 221 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 GOLGA6L19H0YKK7 550 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 TM4SF4P48230 202 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 ORC2Q13416 577 aaPredicted RBP11.38□□□□□ -0.59
NEK9-205ENST00000555405 UGCGQ16739 394 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 TPD52L1Q16890 204 aaPredicted RBP11.38□□□□□ -0.59
NEK9-205ENST00000555405 SHCBP1Q8NEM2 672 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 GPRASP2Q96D09 838 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 CDHR1Q96JP9 859 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 ANO10Q9NW15 660 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 RNF186Q9NXI6 227 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 GDAQ9Y2T3 454 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 WDR64B1ANS9 1081 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 AMPD3Q01432 767 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 MAP2K5Q13163 448 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 MTERF2Q49AM1 385 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 HERC4Q5GLZ8 1057 aaPredicted RBP11.38□□□□□ -0.59
NEK9-205ENST00000555405 AOPEPQ8N6M6 819 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 DDX12PQ92771 950 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 CCDC47Q96A33 483 aaKnown RBP11.38□□□□□ -0.59
NEK9-205ENST00000555405 MAML3Q96JK9 1138 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 MBOAT7Q96N66 472 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 RIT2Q99578 217 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 TINF2Q9BSI4 451 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 NT5C3AQ9H0P0 336 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 BLOC1S4Q9NUP1 217 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 EXOC1Q9NV70 894 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 WRAP73Q9P2S5 460 aaPredicted RBP11.38□□□□□ -0.59
NEK9-205ENST00000555405 MAN1B1Q9UKM7 699 aa11.38□□□□□ -0.59
NEK9-205ENST00000555405 DHX15O43143 795 aaKnown RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 SPATA31C1P0DKV0 1188 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 CTGFP29279 349 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 FCGRTP55899 365 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 SPIRE1Q08AE8 756 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 TTLL4Q14679 1199 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 EPHA7Q15375 998 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 HSDL1Q3SXM5 330 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 RAD54LQ92698 747 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 TRIM47Q96LD4 638 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 SEPT9Q9UHD8 586 aaPredicted RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 PCDHA10Q9Y5I2 948 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 RASSF10A6NK89 507 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 PES1O00541 588 aaKnown RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 ALDH1A1P00352 501 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 RPN1P04843 607 aaKnown RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 RPA1P27694 616 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 DEKP35659 375 aaKnown RBP11.37□□□□□ -0.59
NEK9-205ENST00000555405 SOX10P56693 466 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 PRKCZQ05513 592 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 E2F4Q16254 413 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 STX1AQ16623 288 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 SAMD3Q8N6K7 520 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 FGD4Q96M96 766 aa11.37□□□□□ -0.59
NEK9-205ENST00000555405 AZI2Q9H6S1 392 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms