RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 DBNDD2Q9BQY9 259 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 RAD18Q9NS91 495 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 SUN2Q9UH99 717 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 NBNO60934 754 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 IDI1Q13907 227 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 EXOC3L4Q17RC7 722 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DEPDC1Q5TB30 811 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 EEF2KMTQ96G04 330 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 EGFL8Q99944 293 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ASPSCR1Q9BZE9 553 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 MED4Q9NPJ6 270 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 POLR3EQ9NVU0 708 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 JAK2O60674 1132 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 PTK2Q05397 1052 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 STX19Q8N4C7 294 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 BAZ2BQ9UIF8 2168 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 ARHGEF37A1IGU5 675 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 MEIS1O00470 390 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 PJA2O43164 708 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 PSMA2P25787 234 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 CIITAP33076 1130 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 BPIFB4P59827 614 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 PATL1Q86TB9 770 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DHX38Q92620 1227 aaKnown RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 DMAP1Q9NPF5 467 aaPredicted RBP7.41□□□□□ -1.22
SYNE2-216ENST00000555002 KIAA1024Q9UPX6 916 aa7.41□□□□□ -1.22
SYNE2-216ENST00000555002 TIAM1Q13009 1591 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 E5RI56 91 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 HSPA4LO95757 839 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 SLC7A3Q8WY07 619 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 KLHL29Q96CT2 875 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 NLRP4Q96MN2 994 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 ZNF577Q9BSK1 485 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 ANKRD12Q6UB98 2062 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 TRIM37O94972 964 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 HSPA1AP0DMV8 641 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 HSPA1BP0DMV9 641 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 BCAMP50895 628 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 SH3BGRP55822 239 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 ADALQ6DHV7 355 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 SPATS2Q86XZ4 545 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 LRRC53A6NM62 1247 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 RNF135Q8IUD6 432 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 TRIM58Q8NG06 486 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 SLC26A7Q8TE54 656 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 CENPKQ9BS16 269 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 METTL22Q9BUU2 404 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 CAPN10Q9HC96 672 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 SCOCQ9UIL1 159 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 PCDHA12Q9UN75 941 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 MYO1FO00160 1098 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 VCAM1P19320 739 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 TDRD7Q8NHU6 1098 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 PHF21AQ96BD5 680 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 LLPHQ9BRT6 129 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 hCG_2014768A0A024R1R8 64 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 ZMYND10O75800 440 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 LMNAP02545 664 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 GYG1P46976 350 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 CACNB1Q02641 598 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 CACNB2Q08289 660 aaPredicted RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 KCTD1Q719H9 257 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 PLBD2Q8NHP8 589 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 ACCSQ96QU6 501 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 NACC1Q96RE7 527 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 XPO4Q9C0E2 1151 aaKnown RBP7.4□□□□□ -1.22
SYNE2-216ENST00000555002 CCDC90BQ9GZT6 254 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 MAN1C1Q9NR34 630 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 IQGAP2Q13576 1575 aa7.4□□□□□ -1.22
SYNE2-216ENST00000555002 MEFVO15553 781 aaPredicted RBP7.4□□□□□ -1.23
SYNE2-216ENST00000555002 SLC9A1P19634 815 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 ADCK2Q7Z695 626 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 TESK2Q96S53 571 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 KRT87PA6NCN2 255 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 RASGRF2O14827 1237 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 AP1ARQ63HQ0 302 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 ARMC2Q8NEN0 867 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 RPF1Q9H9Y2 349 aaKnown RBP7.4□□□□□ -1.23
SYNE2-216ENST00000555002 RGL1Q9NZL6 768 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 ATP8A1Q9Y2Q0 1164 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 PAMP19021 973 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 MTERF2Q49AM1 385 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 FAM173BQ6P4H8 233 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 CHMP1BQ7LBR1 199 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 CCNYL1Q8N7R7 359 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 ARPP21Q9UBL0 812 aaPredicted RBP7.4□□□□□ -1.23
SYNE2-216ENST00000555002 RIMS2Q9UQ26 1411 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 EXOC1LA0A1B0GW35 172 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 MYO1DO94832 1006 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 H2AFZP0C0S5 128 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 DMC1Q14565 340 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 AOC3Q16853 763 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 H2AFVQ71UI9 128 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 TCP11Q8WWU5 503 aa7.4□□□□□ -1.23
SYNE2-216ENST00000555002 OTUB1Q96FW1 271 aaPredicted RBP7.4□□□□□ -1.23
SYNE2-216ENST00000555002 CCT5P48643 541 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 POLE2P56282 527 aa7.39□□□□□ -1.23
SYNE2-216ENST00000555002 ZC3H18Q86VM9 953 aaKnown RBP7.39□□□□□ -1.23
SYNE2-216ENST00000555002 NOSTRINQ8IVI9 506 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms