RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 HGSO14964 777 aaPredicted RBP13.56□□□□□ -0.24
COL4A6-209ENST00000545689 SRGAP2BP0DMP2 458 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 KCNJ6P48051 423 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 CCNA1P78396 465 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 NNTQ13423 1086 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 PPP2R5DQ14738 602 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 NAA35Q5VZE5 725 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 SLFN12LQ6IEE8 588 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 SUGCTQ9HAC7 445 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 SCINQ9Y6U3 715 aa13.56□□□□□ -0.24
COL4A6-209ENST00000545689 GOLGA8CPA6NN73 597 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 SGK1O00141 431 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ZBTB5O15062 677 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ORC4O43929 436 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 FTCDO95954 541 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 DR1Q01658 176 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ADCY2Q08462 1091 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 NCAPG2Q86XI2 1143 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 LIG3P49916 1009 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 DHX9Q08211 1270 aaKnown RBP13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ASPHQ12797 758 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 KCTD2Q14681 263 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 C6orf118Q5T5N4 469 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 FBXO38Q6PIJ6 1188 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 GADL1Q6ZQY3 521 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 MIPOL1Q8TD10 442 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 CEP170P1Q96L14 293 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 OVOS2A0A0G2JMS6 1433 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 OVOS2A0A0J9YW53 1432 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 OVOS2Q6IE36 1432 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 A0A087WWV3 80 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 CYP2D7A0A087X1C5 515 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 PODXLO00592 558 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 MCF2LO15068 1137 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 KRT1P04264 644 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 PNMA6AP0CW24 399 aaPredicted RBP13.55□□□□□ -0.24
COL4A6-209ENST00000545689 YWHAGP61981 247 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL4A6-209ENST00000545689 PRKG1Q13976 671 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 DCPSQ96C86 337 aaKnown RBP13.55□□□□□ -0.24
COL4A6-209ENST00000545689 CLIC2O15247 247 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 KAZNQ674X7 775 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 KCTD16Q68DU8 428 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 DNAJC24Q6P3W2 148 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 DHX40Q8IX18 779 aaKnown RBP13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ABCB6Q9NP58 842 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 PTPN22Q9Y2R2 807 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 CPDO75976 1380 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
COL4A6-209ENST00000545689 A0A1W2PQC6 194 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 UBE2SQ16763 222 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 PTPROQ16827 1216 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 FAM20AQ96MK3 541 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 SLC26A4O43511 780 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 ZWINTO95229 277 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 PLTPP55058 493 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 FOXO4P98177 505 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 BSPRYQ5W0U4 402 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 ATP8A1Q9Y2Q0 1164 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 COL15A1P39059 1388 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 LDHAP00338 332 aaKnown RBP13.54□□□□□ -0.24
COL4A6-209ENST00000545689 ALKBH5Q6P6C2 394 aaKnown RBP13.54□□□□□ -0.24
COL4A6-209ENST00000545689 VCX3AQ9NNX9 186 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 UBN2Q6ZU65 1347 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 OSBPP22059 807 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 RFX1P22670 979 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 HLFQ16534 295 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 TOGARAM2Q6ZUX3 1019 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 ENAHQ8N8S7 591 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-209ENST00000545689 GBP5Q96PP8 586 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 FMO2Q99518 471 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 KIAA1586Q9HCI6 787 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 NARFQ9UHQ1 456 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 SYNGAP1Q96PV0 1343 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 ARHGAP42A6NI28 874 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 GDF11O95390 407 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
COL4A6-209ENST00000545689 SUPT20HL1Q3ZLR7 823 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 MYO3BQ8WXR4 1341 aa13.54□□□□□ -0.24
COL4A6-209ENST00000545689 NR1D1P20393 614 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 RWDD2BP57060 319 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 EXOSC10Q01780 885 aaKnown RBP13.53□□□□□ -0.24
COL4A6-209ENST00000545689 SH3RF3Q8TEJ3 882 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-209ENST00000545689 TXLNGQ9NUQ3 528 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 SPICE1Q8N0Z3 855 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 ZNF512BQ96KM6 892 aaPredicted RBP13.53□□□□□ -0.24
COL4A6-209ENST00000545689 KIF2CQ99661 725 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 NCAPGQ9BPX3 1015 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 EDEM3Q9BZQ6 932 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 MEIS1O00470 390 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 ADRA2BP18089 450 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 MSH2P43246 934 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 GSDMBQ8TAX9 411 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 ZMYND12Q9H0C1 365 aa13.53□□□□□ -0.24
COL4A6-209ENST00000545689 PPRC1Q5VV67 1664 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms