RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 PIK3AP1Q6ZUJ8 805 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 TMTC3Q6ZXV5 915 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 TMC3Q7Z5M5 1100 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 TBC1D1Q86TI0 1168 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 SEC14L1Q92503 715 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 BAP1Q92560 729 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 KLHL29Q96CT2 875 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 MS4A14Q96JA4 679 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 TMEM109Q9BVC6 243 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 VCXQ9H320 206 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 EPB41L4AQ9HCS5 686 aaPredicted RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 CNNM1Q9NRU3 951 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 CNOT7Q9UIV1 285 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 RPL26L1Q9UNX3 145 aaKnown RBP5.46□□□□□ -1.54
LMO3-229ENST00000543721 ATP6V0A2Q9Y487 856 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 SLC4A4Q9Y6R1 1079 aa5.46□□□□□ -1.54
LMO3-229ENST00000543721 CCDC194A0A1B0GVG4 234 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 MPHOSPH10O00566 681 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 OPLAHO14841 1288 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 DIAPH2O60879 1101 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 SLC1A4P43007 532 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 MMP13P45452 471 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 PAPOLAP51003 745 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 ASIC1P78348 528 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 DHX9Q08211 1270 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 EHHADHQ08426 723 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 DYNC1I2Q13409 638 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 UAP1Q16222 522 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 ACCSLQ4AC99 568 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 SDCCAG8Q86SQ7 713 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 BLIDQ8IZY5 108 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 THEMISQ8N1K5 641 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 GUF1Q8N442 669 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 AGAP11Q8TF27 550 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 ATXN2LQ8WWM7 1075 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 ANKS1AQ92625 1134 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 CALML4Q96GE6 196 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 ZSCAN10Q96SZ4 725 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 FAM207AQ9NSI2 230 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 SMARCAL1Q9NZC9 954 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 RASAL2Q9UJF2 1139 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 MYH2Q9UKX2 1941 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 PKD1L3Q7Z443 1732 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 AKAP11Q9UKA4 1901 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 KCNK3O14649 394 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 RGS16O15492 202 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 CEP104O60308 925 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 NPTXRO95502 500 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 A1BGP04217 495 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 PLEKP08567 350 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 SLC5A1P13866 664 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 PEX19P40855 299 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 GNAQP50148 359 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 RPS6KA3P51812 740 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 COPS2P61201 443 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 MRPS25P82663 173 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 TAF11Q15544 211 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 PFKFB3Q16875 520 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 SGSM1Q2NKQ1 1148 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 TSNAXIP1Q2TAA8 658 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 EARS2Q5JPH6 523 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 DENND2CQ68D51 928 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 VPS36Q86VN1 386 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 NEK9Q8TD19 979 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 SH3TC2Q8TF17 1288 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 GRAMD1AQ96CP6 724 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 FMO2Q99518 471 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 EHD2Q9NZN4 543 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 CNOT8Q9UFF9 292 aaKnown RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 INTUQ9ULD6 942 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 USP15Q9Y4E8 981 aaPredicted RBP5.45□□□□□ -1.54
LMO3-229ENST00000543721 TJP1Q07157 1748 aa5.45□□□□□ -1.54
LMO3-229ENST00000543721 KRIT1O00522 736 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PDE8BO95263 885 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PRKAR2AP13861 404 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 CHN1P15882 459 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 HSPA6P17066 643 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 KLK7P49862 253 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 DRG2P55039 364 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 NPEPPSP55786 919 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 PUM3Q15397 648 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 SLC5A9Q2M3M2 681 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 CWF19L1Q69YN2 538 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 MAGEB6Q8N7X4 407 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 C4orf32Q8N8J7 132 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ZBTB38Q8NAP3 1195 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 TTLL11Q8NHH1 800 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 NAF1Q96HR8 494 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 RUNDC3BQ96NL0 473 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SELENOSQ9BQE4 189 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 ZKSCAN3Q9BRR0 538 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 TRIM9Q9C026 710 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 KCNMB3Q9NPA1 279 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 SUCLA2Q9P2R7 463 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 STK17AQ9UEE5 414 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 MTRF1LQ9UGC7 380 aaKnown RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 TTC7AQ9ULT0 858 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 C1orf167Q5SNV9 1468 aa5.44□□□□□ -1.54
LMO3-229ENST00000543721 A0A0A6YYK5 440 aaPredicted RBP5.44□□□□□ -1.54
LMO3-229ENST00000543721 ZSCAN5CA6NGD5 496 aaPredicted RBP5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms