RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 DEFB129Q9H1M3 183 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 KCTD10Q9H3F6 313 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 HAUS4Q9H6D7 363 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 REXO2Q9Y3B8 237 aaKnown RBP11.98□□□□□ -0.49
NECAP1-206ENST00000542095 DOCK1Q14185 1865 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 WDR46O15213 610 aaKnown RBP11.98□□□□□ -0.49
NECAP1-206ENST00000542095 PSMD10O75832 226 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 ICAM1P05362 532 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 MARSP56192 900 aaKnown RBP11.98□□□□□ -0.49
NECAP1-206ENST00000542095 EDRF1Q3B7T1 1238 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 CEP55Q53EZ4 464 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 SLC35F6Q8N357 371 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 ARID3AQ99856 593 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 MMRN2Q9H8L6 949 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 NHEJ1Q9H9Q4 299 aaPredicted RBP11.98□□□□□ -0.49
NECAP1-206ENST00000542095 CCPG1Q9ULG6 757 aa11.98□□□□□ -0.49
NECAP1-206ENST00000542095 EIF3CLB5ME19 914 aaKnown RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 GAS7O60861 476 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 MUTP22033 750 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 HNRNPH3P31942 346 aaKnown RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 PRELPP51888 382 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 ZNF662Q6ZS27 426 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 ZC3H3Q8IXZ2 948 aaKnown RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 PRPF38AQ8NAV1 312 aaKnown RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 TEPSINQ96N21 525 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 EIF3CQ99613 913 aaKnown RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 NAPGQ99747 312 aaPredicted RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 WDR11Q9BZH6 1224 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 EDEM3Q9BZQ6 932 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 BHMT2Q9H2M3 363 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 NFKBIEO00221 500 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 TBCAO75347 108 aaKnown RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 INPP5BP32019 993 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 HSD17B4P51659 736 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 UBXN2AP68543 259 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 FBXO38Q6PIJ6 1188 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 KRT26Q7Z3Y9 468 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 KIAA1328Q86T90 577 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 SFR1Q86XK3 245 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 NEK11Q8NG66 645 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 HSD17B14Q9BPX1 270 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 MTFR1LQ9H019 292 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 FAM207AQ9NSI2 230 aaPredicted RBP11.97□□□□□ -0.49
NECAP1-206ENST00000542095 RGL1Q9NZL6 768 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 PLAGL2Q9UPG8 496 aa11.97□□□□□ -0.49
NECAP1-206ENST00000542095 CETN3O15182 167 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 HERVK_113P62684 666 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 ADAM9Q13443 819 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 CTTNQ14247 550 aaKnown RBP11.96□□□□□ -0.49
NECAP1-206ENST00000542095 ARHGAP27Q6ZUM4 889 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 EPM2AIP1Q7L775 607 aaPredicted RBP11.96□□□□□ -0.49
NECAP1-206ENST00000542095 MCF2L2Q86YR7 1114 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 DYDC2Q96IM9 177 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 AGBL1Q96MI9 1066 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 ZNF577Q9BSK1 485 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 KIAA1683Q9H0B3 1180 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 CDC23Q9UJX2 597 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 FAM184BQ9ULE4 1060 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 GUCA1BQ9UMX6 200 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 SCAF8Q9UPN6 1271 aaKnown RBP11.96□□□□□ -0.49
NECAP1-206ENST00000542095 PARP14Q460N5 1801 aa11.96□□□□□ -0.49
NECAP1-206ENST00000542095 CHMP2AO43633 222 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 KRT86O43790 486 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 CALUO43852 315 aaPredicted RBP11.96□□□□□ -0.5
NECAP1-206ENST00000542095 CTNND1O60716 968 aaKnown RBP11.96□□□□□ -0.5
NECAP1-206ENST00000542095 SLITRK3O94933 977 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 ABL1P00519 1130 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 H2AFXP16104 143 aaPredicted RBP11.96□□□□□ -0.5
NECAP1-206ENST00000542095 GAP43P17677 238 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 CASP5P51878 434 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 KNOP1Q1ED39 458 aaKnown RBP11.96□□□□□ -0.5
NECAP1-206ENST00000542095 CCDC122Q5T0U0 273 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 TRIM59Q8IWR1 403 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 TPH2Q8IWU9 490 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 CEP112Q8N8E3 955 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 HOOK2Q96ED9 719 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 CCDC42Q96M95 316 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 RUSC1Q9BVN2 902 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 TEKT3Q9BXF9 490 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.5
NECAP1-206ENST00000542095 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.96□□□□□ -0.5
NECAP1-206ENST00000542095 ZNF536O15090 1300 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
NECAP1-206ENST00000542095 EPHB6O15197 1021 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 ERCC3P19447 782 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 NR2F2P24468 414 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 SPA17Q15506 151 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 RINT1Q6NUQ1 792 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 CACNA2D4Q7Z3S7 1137 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 GOLGA1Q92805 767 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 JAKMIP2Q96AA8 810 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 MXRA8Q9BRK3 442 aa11.95□□□□□ -0.5
NECAP1-206ENST00000542095 ARGLU1Q9NWB6 273 aaPredicted RBP11.95□□□□□ -0.5
NECAP1-206ENST00000542095 PPP1R1BQ9UD71 204 aaPredicted RBP11.95□□□□□ -0.5
NECAP1-206ENST00000542095 PDXKO00764 312 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 FAM13AO94988 1023 aa11.94□□□□□ -0.5
NECAP1-206ENST00000542095 EGFRP00533 1210 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms