RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MYO1CO00159 1063 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 MYBL2P10244 700 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 INPP5BP32019 993 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 SAMD1Q6SPF0 538 aaPredicted RBP19■□□□□ 0.63
SPIDR-227ENST00000541342 KCNK18Q7Z418 384 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 BBXQ8WY36 941 aaPredicted RBP19■□□□□ 0.63
SPIDR-227ENST00000541342 LENG9Q96B70 501 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 CAPZA3Q96KX2 299 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 FAM86B1E9PN63 330 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 ZNF185O15231 689 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 PRPF6O94906 941 aaKnown RBP19■□□□□ 0.63
SPIDR-227ENST00000541342 FAM86B2P0C5J1 330 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 MOXD1Q6UVY6 613 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 SRLQ86TD4 932 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 PURBQ96QR8 312 aaKnown RBP19■□□□□ 0.63
SPIDR-227ENST00000541342 TUBGCP2Q9BSJ2 902 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 FEM1BQ9UK73 627 aa19■□□□□ 0.63
SPIDR-227ENST00000541342 SBF1O95248 1867 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 TMEM119Q4V9L6 283 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 TRPM4Q8TD43 1214 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 FAM204AQ9H8W3 233 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 VIPAS39Q9H9C1 493 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 MED4Q9NPJ6 270 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 HPCAL4Q9UM19 191 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 DOCK1Q14185 1865 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 ZNF263O14978 683 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 ZMYND10O75800 440 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 FOSP01100 380 aaPredicted RBP18.99■□□□□ 0.63
SPIDR-227ENST00000541342 DNM2P50570 870 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 MIIPQ5JXC2 388 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 KRT79Q5XKE5 535 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 MCTP2Q6DN12 878 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 FAM160B2Q86V87 743 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 ETNPPLQ8TBG4 499 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 JAKMIP2Q96AA8 810 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 NHEJ1Q9H9Q4 299 aaPredicted RBP18.99■□□□□ 0.63
SPIDR-227ENST00000541342 PSMA7O14818 248 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 EXOC1Q9NV70 894 aa18.99■□□□□ 0.63
SPIDR-227ENST00000541342 MARCH6O60337 910 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 CTNND1O60716 968 aaKnown RBP18.98■□□□□ 0.63
SPIDR-227ENST00000541342 Q4G0T1 1027 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 PRR16Q569H4 304 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 PRAMEF18Q5VWM3 479 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.98■□□□□ 0.63
SPIDR-227ENST00000541342 GSPT2Q8IYD1 628 aaKnown RBP18.98■□□□□ 0.63
SPIDR-227ENST00000541342 ZFP91Q96JP5 570 aaPredicted RBP18.98■□□□□ 0.63
SPIDR-227ENST00000541342 STK17AQ9UEE5 414 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 MYH10P35580 1976 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 RNF40O75150 1001 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 ANGEL2Q5VTE6 544 aaKnown RBP18.98■□□□□ 0.63
SPIDR-227ENST00000541342 ANKRD40Q6AI12 368 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 CSGALNACT2Q8N6G5 542 aa18.98■□□□□ 0.63
SPIDR-227ENST00000541342 LARP4BQ92615 738 aaKnown RBP18.98■□□□□ 0.63
SPIDR-227ENST00000541342 CFBP00751 764 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 CYP27A1Q02318 531 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 STK4Q13043 487 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 CYP2W1Q8TAV3 490 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 RAD54LQ92698 747 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 CDK5RAP3Q96JB5 506 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 GDAP1L1Q96MZ0 367 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 CWC15Q9P013 229 aaKnown RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 FZD1Q9UP38 647 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 RRP15Q9Y3B9 282 aaKnown RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 TARSL2A2RTX5 802 aaKnown RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 MYMKA6NI61 221 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 HSP90B2PQ58FF3 399 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 LRRC31Q6UY01 552 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 ARHGAP27Q6ZUM4 889 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 SV2BQ7L1I2 683 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 RIN2Q8WYP3 895 aaPredicted RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 EIF3CLB5ME19 914 aaKnown RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 TRIM21P19474 475 aaKnown RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 STAT3P40763 770 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 ASIC1P78348 528 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 KRT83P78385 493 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 SPIRE1Q08AE8 756 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 KIAA1328Q86T90 577 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 EIF3CQ99613 913 aaKnown RBP18.97■□□□□ 0.63
SPIDR-227ENST00000541342 KIAA1683Q9H0B3 1180 aa18.97■□□□□ 0.63
SPIDR-227ENST00000541342 ZNF536O15090 1300 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 PLEKP08567 350 aaPredicted RBP18.96■□□□□ 0.63
SPIDR-227ENST00000541342 FCER1AP12319 257 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 CIITAP33076 1130 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 LDHDQ86WU2 507 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 DHTKD1Q96HY7 919 aaPredicted RBP18.96■□□□□ 0.63
SPIDR-227ENST00000541342 CNOT6LQ96LI5 555 aaKnown RBP18.96■□□□□ 0.63
SPIDR-227ENST00000541342 GPRC5DQ9NZD1 345 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 AMPD3Q01432 767 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 COG1Q8WTW3 980 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 TSPYL1Q9H0U9 437 aa18.96■□□□□ 0.63
SPIDR-227ENST00000541342 KRT86O43790 486 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 ZBED6P86452 979 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 PDE4DQ08499 809 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 HYIQ5T013 277 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 P2RX5Q93086 422 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 HPS3Q969F9 1004 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 AGBL1Q96MI9 1066 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 AGPSO00116 658 aa18.95■□□□□ 0.62
SPIDR-227ENST00000541342 CYP3A4P08684 503 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms