RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 ARHGEF5Q12774 1597 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 AURKAO14965 403 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 KCNH1O95259 989 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 IFIT2P09913 472 aaKnown RBP7.43□□□□□ -1.22
MRE11-209ENST00000540013 TXKP42681 527 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 HSPA2P54652 639 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 PABPC4Q13310 644 aaKnown RBP eCLIP7.43□□□□□ -1.22
MRE11-209ENST00000540013 MYBPC2Q14324 1141 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 ZC3H12BQ5HYM0 836 aaKnown RBP7.43□□□□□ -1.22
MRE11-209ENST00000540013 RTP2Q5QGT7 225 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 ZNF227Q86WZ6 799 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 CNPY4Q8N129 248 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 MAGEB6Q8N7X4 407 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 ASIC4Q96FT7 647 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 MRGPRX3Q96LB0 322 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 SLC26A8Q96RN1 970 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 PTPRHQ9HD43 1115 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 CYP26B1Q9NR63 512 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 ERVK13-1Q9NX77 482 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 CLTCQ00610 1675 aaKnown RBP7.43□□□□□ -1.22
MRE11-209ENST00000540013 UHRF1BP1Q6BDS2 1440 aa7.43□□□□□ -1.22
MRE11-209ENST00000540013 A0A1W2PQ45 241 aaPredicted RBP7.42□□□□□ -1.22
MRE11-209ENST00000540013 A0A1W2PQY0 241 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 FGF10O15520 208 aaPredicted RBP7.42□□□□□ -1.22
MRE11-209ENST00000540013 F2P00734 622 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 ITGAVP06756 1048 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 HOXC12P31275 282 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 POU5F1Q01860 360 aaKnown RBP7.42□□□□□ -1.22
MRE11-209ENST00000540013 HSP90AA2PQ14568 343 aaPredicted RBP7.42□□□□□ -1.22
MRE11-209ENST00000540013 L1TD1Q5T7N2 865 aaKnown RBP7.42□□□□□ -1.22
MRE11-209ENST00000540013 CCDC174Q6PII3 467 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 PDILTQ8N807 584 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 ABHD4Q8TB40 342 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 G6PC3Q9BUM1 346 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 RTFDC1Q9BY42 306 aaPredicted RBP7.42□□□□□ -1.22
MRE11-209ENST00000540013 NKX2-4Q9H2Z4 354 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 MYOM3Q5VTT5 1437 aa7.42□□□□□ -1.22
MRE11-209ENST00000540013 C2orf71A6NGG8 1288 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 WTIPA6NIX2 430 aaPredicted RBP7.41□□□□□ -1.22
MRE11-209ENST00000540013 STXBP3O00186 592 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 PAX4O43316 350 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 VAMP4O75379 141 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 EYA4O95677 639 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 CPP00450 1065 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 MYL3P08590 195 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 FAM163BP0C2L3 166 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 IFNGR1P15260 489 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 TAL1P17542 331 aaPredicted RBP7.41□□□□□ -1.22
MRE11-209ENST00000540013 COPB2P35606 906 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 RTP1P59025 263 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 KCNMB1Q16558 191 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 DPY19L1Q2PZI1 675 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 GTF2IRD2BQ6EKJ0 949 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 ERAP2Q6P179 960 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 GALNT18Q6P9A2 607 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
MRE11-209ENST00000540013 CEP128Q6ZU80 1094 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 GTF2IRD2Q86UP8 949 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 ZSWIM9Q86XI8 627 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 PASD1Q8IV76 773 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 CHMP4CQ96CF2 233 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 HOOK2Q96ED9 719 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 HHIPL1Q96JK4 782 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 PTCHD1Q96NR3 888 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 GPR55Q9Y2T6 319 aaPredicted RBP7.41□□□□□ -1.22
MRE11-209ENST00000540013 TAF6LQ9Y6J9 622 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 DHX29Q7Z478 1369 aaKnown RBP7.41□□□□□ -1.22
MRE11-209ENST00000540013 MIA2Q96PC5 1412 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 STRCQ7RTU9 1775 aa7.41□□□□□ -1.22
MRE11-209ENST00000540013 FADS2P1A8MWK0 482 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 TIMM44O43615 452 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 RFPL1O75677 317 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 TCEA3O75764 348 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 FAM153BP0C7A2 387 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 TSPY4P0CV99 314 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 TSPY10P0CW01 314 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 TRIM27P14373 513 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 ZEB1P37275 1124 aaPredicted RBP7.4□□□□□ -1.22
MRE11-209ENST00000540013 HTR3AP46098 478 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 MTMR1Q13613 665 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 FAM83BQ5T0W9 1011 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 CCDC70Q6NSX1 233 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 GGT6Q6P531 493 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 HDGFL2Q7Z4V5 671 aaPredicted RBP7.4□□□□□ -1.22
MRE11-209ENST00000540013 AASDHPPTQ9NRN7 309 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 PPP2R3BQ9Y5P8 575 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 ZMYM3Q14202 1370 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 NPATQ14207 1427 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 MAST1Q9Y2H9 1570 aa7.4□□□□□ -1.22
MRE11-209ENST00000540013 CFAP65Q6ZU64 1925 aaKnown RBP7.39□□□□□ -1.23
MRE11-209ENST00000540013 FAM135AQ9P2D6 1515 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 USP2O75604 605 aaPredicted RBP7.39□□□□□ -1.23
MRE11-209ENST00000540013 PAPLNO95428 1278 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 LDHCP07864 332 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 GLI1P08151 1106 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 PAMP19021 973 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 IQCEQ6IPM2 695 aa7.39□□□□□ -1.23
MRE11-209ENST00000540013 ZPBP2Q6X784 338 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms