RNA–Protein interactions for RNA: ENST00000539416.5

NEK6-212, Transcript of NIMA related kinase 6, humanhuman

TSL 2 BASIC

Gene NEK6, Length 2,582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-212ENST00000539416 ZSWIM5Q9P217 1185 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 ARHGAP20Q9P2F6 1191 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 LRP2BPQ9P2M1 347 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 ZNF219Q9P2Y4 722 aaPredicted RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 CCT8L1PA6NM43 557 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 RIMBP2O15034 1052 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 BUB1O43683 1085 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 RPN1P04843 607 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 LINGO3P0C6S8 592 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 DNM2P50570 870 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 RPS6KA3P51812 740 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 PPP2R2AP63151 447 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 ZNF844Q08AG5 666 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 ODF2Q5BJF6 829 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 CRELD2Q6UXH1 353 aaPredicted RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 TAX1BP1Q86VP1 789 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 WHAMMQ8TF30 809 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 NOC3LQ8WTT2 800 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 MTMR8Q96EF0 704 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 LRRC4CQ9HCJ2 640 aa13.08□□□□□ -0.32
NEK6-212ENST00000539416 NOVA2Q9UNW9 492 aaKnown RBP13.08□□□□□ -0.32
NEK6-212ENST00000539416 ZNF532Q9HCE3 1301 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 CFAP221Q4G0U5 840 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 MDM1Q8TC05 714 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 ZKSCAN3Q9BRR0 538 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 UBAC1Q9BSL1 405 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 HOMER3Q9NSC5 361 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 EXOC1Q9NV70 894 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 MAST2Q6P0Q8 1798 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 RAD51CO43502 376 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 CAND2O75155 1236 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 ADSSL1Q8N142 457 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 CRACR2BQ8N4Y2 399 aaPredicted RBP13.07□□□□□ -0.32
NEK6-212ENST00000539416 PROCA1Q8NCQ7 364 aaPredicted RBP13.07□□□□□ -0.32
NEK6-212ENST00000539416 ALS2CR12Q96Q35 445 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 TUBGCP2Q9BSJ2 902 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
NEK6-212ENST00000539416 ORC4O43929 436 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 CLSTN1O94985 981 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 EEF1GP26641 437 aaKnown RBP13.06□□□□□ -0.32
NEK6-212ENST00000539416 EIF4A3P38919 411 aaKnown RBP13.06□□□□□ -0.32
NEK6-212ENST00000539416 ABL2P42684 1182 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 KIF11P52732 1056 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 RTN1Q16799 776 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 ARMC3Q5W041 872 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 PODNQ7Z5L7 613 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 MAGEB6Q8N7X4 407 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 P3H4Q92791 437 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 TRIM47Q96LD4 638 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 FAM167BQ9BTA0 163 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 ABCF2Q9UG63 623 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 CORO1CQ9ULV4 474 aaPredicted RBP13.06□□□□□ -0.32
NEK6-212ENST00000539416 hCG_1642624A0A1W2PR95 340 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 DEXIO95424 95 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 PAEPP09466 180 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 ECHS1P30084 290 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 SSR1P43307 286 aaKnown RBP13.06□□□□□ -0.32
NEK6-212ENST00000539416 RIPK1Q13546 671 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 HLTFQ14527 1009 aaKnown RBP eCLIP13.06□□□□□ -0.322e-6■■■■■ 29.6
NEK6-212ENST00000539416 LRIG3Q6UXM1 1119 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 DDX42Q86XP3 938 aaKnown RBP eCLIP13.06□□□□□ -0.32
NEK6-212ENST00000539416 SPICE1Q8N0Z3 855 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
NEK6-212ENST00000539416 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
NEK6-212ENST00000539416 ERICH2A1L162 156 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 EPHB6O15197 1021 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 MYBL1P10243 752 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 CTNNA1P35221 906 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 LIFRP42702 1097 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 RBM5P52756 815 aaKnown RBP eCLIP13.05□□□□□ -0.32
NEK6-212ENST00000539416 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 ERVK-9P63128 1117 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 TRAF1Q13077 416 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 FAM133BQ5BKY9 247 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 ZC3H12AQ5D1E8 599 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 KLHL7Q8IXQ5 586 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 PRCCQ92733 491 aaPredicted RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 MAGOHBQ96A72 148 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 FERMT2Q96AC1 680 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 KCNMB3Q9NPA1 279 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 SLC12A4Q9UP95 1085 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 AGAP1Q9UPQ3 857 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 PRDM1O75626 825 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 FLT3P36888 993 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 MAGEA1P43355 309 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 FKBP1AP62942 108 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 KCNJ2P63252 427 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 PTGDRQ13258 359 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 IL17AQ16552 155 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 CCDC88AQ3V6T2 1871 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 CCDC197Q8NCU1 140 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 NSUN4Q96CB9 384 aaKnown RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 NEUROG2Q9H2A3 272 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 THAP9Q9H5L6 903 aa13.05□□□□□ -0.32
NEK6-212ENST00000539416 MAGEC2Q9UBF1 373 aaPredicted RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 PPP1R1BQ9UD71 204 aaPredicted RBP13.05□□□□□ -0.32
NEK6-212ENST00000539416 SUGT1Q9Y2Z0 365 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms