RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GJB7Q6PEY0 223 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 RSRC2Q7L4I2 434 aaKnown RBP9.61□□□□□ -0.87
UBE3B-208ENST00000538070 LRRC27Q9C0I9 530 aa9.61□□□□□ -0.87
UBE3B-208ENST00000538070 EML1O00423 815 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 PSMD14O00487 310 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 ONECUT3O60422 494 aaPredicted RBP9.6□□□□□ -0.87
UBE3B-208ENST00000538070 SLC9A1P19634 815 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 KLHL30Q0D2K2 578 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 DNAJC21Q5F1R6 531 aaKnown RBP9.6□□□□□ -0.87
UBE3B-208ENST00000538070 KIAA1755Q5JYT7 1200 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 SFMBT2Q5VUG0 894 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 HAUS3Q68CZ6 603 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 SYCP3Q8IZU3 236 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 DNAJC19Q96DA6 116 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 DYDC2Q96IM9 177 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 MS4A14Q96JA4 679 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 YDJCA8MPS7 323 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 MSH4O15457 936 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 GAS7O60861 476 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 MYCLP12524 364 aaPredicted RBP9.6□□□□□ -0.87
UBE3B-208ENST00000538070 CASP4P49662 377 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 LRCH2Q5VUJ6 765 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 PPP4R3AQ6IN85 833 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 DEFB132Q7Z7B7 95 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 BANK1Q8NDB2 785 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 COG1Q8WTW3 980 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 SCFD1Q8WVM8 642 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 CNKSR1Q969H4 720 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 RUSC1Q9BVN2 902 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 ARHGEF10LQ9HCE6 1279 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 hCG_1984214I3L0E3 225 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 ALAS1P13196 640 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 KCNH2Q12809 1159 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 ZNF713Q8N859 430 aaPredicted RBP9.6□□□□□ -0.87
UBE3B-208ENST00000538070 RIN2Q8WYP3 895 aaPredicted RBP9.6□□□□□ -0.87
UBE3B-208ENST00000538070 PCIF1Q9H4Z3 704 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 RABGAP1Q9Y3P9 1069 aa9.6□□□□□ -0.87
UBE3B-208ENST00000538070 MYH1P12882 1939 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 GCFC2P16383 781 aaKnown RBP9.59□□□□□ -0.87
UBE3B-208ENST00000538070 SMARCA1P28370 1054 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 EHHADHQ08426 723 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 WHAMMP3Q1A5X7 153 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 DCAF4Q8WV16 495 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 IFT81Q8WYA0 676 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 GTPBP4Q9BZE4 634 aaKnown RBP9.59□□□□□ -0.87
UBE3B-208ENST00000538070 NYAP2Q9P242 653 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 ARMCX3Q9UH62 379 aaPredicted RBP9.59□□□□□ -0.87
UBE3B-208ENST00000538070 SUGT1Q9Y2Z0 365 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 GJA3Q9Y6H8 435 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 ABCB11O95342 1321 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 KDM3AQ9Y4C1 1321 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 PDE2AO00408 941 aaPredicted RBP9.59□□□□□ -0.87
UBE3B-208ENST00000538070 VAV2P52735 878 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 LRRC63Q05C16 580 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 GPS2Q13227 327 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 ARHGAP44Q17R89 818 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 KIAA0753Q2KHM9 967 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 SLC9C1Q4G0N8 1177 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 ARSHQ5FYA8 562 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 AGBL1Q96MI9 1066 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 ALS2CR12Q96Q35 445 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 EIF2AK1Q9BQI3 630 aaKnown RBP9.59□□□□□ -0.87
UBE3B-208ENST00000538070 PACSIN1Q9BY11 444 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 STK32BQ9NY57 414 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 NBPF9Q3BBW0 867 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 TMEM119Q4V9L6 283 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 NSMFQ6X4W1 530 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 LRRC55Q6ZSA7 311 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 SLFN12Q8IYM2 578 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 ELMO3Q96BJ8 720 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 HYOU1Q9Y4L1 999 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 KIAA1551Q9HCM1 1747 aa9.59□□□□□ -0.87
UBE3B-208ENST00000538070 TMEM150BA6NC51 233 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 H3BQF6 201 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 GCOM1H8Y6P7 765 aaPredicted RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 POLR2MP0CAP2 368 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 COG2Q14746 738 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 LLGL1Q15334 1064 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ERGIC2Q96RQ1 377 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 FUT8Q9BYC5 575 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ZNF341Q9BYN7 854 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ATF5Q9Y2D1 282 aaPredicted RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ESYT3A0FGR9 886 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 KLRG2A4D1S0 409 aaPredicted RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 EIF3CLB5ME19 914 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ZRANB2O95218 330 aaKnown RBP eCLIP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 TRIM49P0CI25 452 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 TRIM49CP0CI26 452 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 RXRBP28702 533 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 KCNMA1Q12791 1236 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ASIC2Q16515 512 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 CCDC70Q6NSX1 233 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 HDXQ7Z353 690 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 ADAT2Q7Z6V5 191 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 HDAC7Q8WUI4 952 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 AKT1S1Q96B36 256 aa9.58□□□□□ -0.88
UBE3B-208ENST00000538070 PURBQ96QR8 312 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 EIF3CQ99613 913 aaKnown RBP9.58□□□□□ -0.88
UBE3B-208ENST00000538070 CENPHQ9H3R5 247 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms