RNA–Protein interactions for RNA: ENST00000537230.2

TRIM25-202, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-202ENST00000537230 HDLBPQ00341 1268 aaKnown RBP14.22□□□□□ -0.13
TRIM25-202ENST00000537230 CYP4A11Q02928 519 aa14.22□□□□□ -0.13
TRIM25-202ENST00000537230 PSMD2Q13200 908 aa14.22□□□□□ -0.13
TRIM25-202ENST00000537230 FBXO11Q86XK2 927 aa14.22□□□□□ -0.13
TRIM25-202ENST00000537230 TBC1D5Q92609 795 aa14.22□□□□□ -0.13
TRIM25-202ENST00000537230 SECISBP2LQ93073 1101 aaKnown RBP14.22□□□□□ -0.13
TRIM25-202ENST00000537230 CCDC42Q96M95 316 aa14.22□□□□□ -0.13
TRIM25-202ENST00000537230 NT5C3AQ9H0P0 336 aa14.22□□□□□ -0.13
TRIM25-202ENST00000537230 CLRN2A0PK11 232 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 TCP10L2B9ZVM9 353 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 RNF40O75150 1001 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 SPATA31C1P0DKV0 1188 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 EIF4A3P38919 411 aaKnown RBP14.21□□□□□ -0.13
TRIM25-202ENST00000537230 SLC12A3P55017 1021 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 PABPC4Q13310 644 aaKnown RBP eCLIP14.21□□□□□ -0.134e-6■■■□□ 17.3
TRIM25-202ENST00000537230 SYDE2Q5VT97 1194 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 CCDC170Q8IYT3 715 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 ACER1Q8TDN7 264 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 PDGFDQ9GZP0 370 aaPredicted RBP14.21□□□□□ -0.13
TRIM25-202ENST00000537230 NLRC4Q9NPP4 1024 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 KRT86O43790 486 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 SYF2O95926 243 aaKnown RBP14.21□□□□□ -0.13
TRIM25-202ENST00000537230 HNRNPH3P31942 346 aaKnown RBP14.21□□□□□ -0.13
TRIM25-202ENST00000537230 USP14P54578 494 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 LRRC31Q6UY01 552 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 GSPT2Q8IYD1 628 aaKnown RBP14.21□□□□□ -0.13
TRIM25-202ENST00000537230 HINFPQ9BQA5 517 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 COL4A3BPQ9Y5P4 624 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 CAPN6Q9Y6Q1 641 aa14.21□□□□□ -0.13
TRIM25-202ENST00000537230 KDM3AQ9Y4C1 1321 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 C21orf2O43822 256 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 BMP3P12645 472 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 POLD1P28340 1107 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 KIF11P52732 1056 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 FKBP3Q00688 224 aaKnown RBP14.21□□□□□ -0.14
TRIM25-202ENST00000537230 SKIDA1Q1XH10 827 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 STYK1Q6J9G0 422 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 GMCL1P1Q8NEA9 526 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 KCTD10Q9H3F6 313 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 SAR1BQ9Y6B6 198 aa14.21□□□□□ -0.14
TRIM25-202ENST00000537230 PDE2AO00408 941 aaPredicted RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 NOL4O94818 638 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 FKBP1AP62942 108 aaKnown RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 CDK17Q00537 523 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 ANKRD13CQ8N6S4 541 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 FLAD1Q8NFF5 587 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 GMCL1Q96IK5 515 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 PURBQ96QR8 312 aaKnown RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 TSG101Q99816 390 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 LRRC27Q9C0I9 530 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 MED4Q9NPJ6 270 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 BMP2KQ9NSY1 1161 aaPredicted RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 SALL4Q9UJQ4 1053 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 PRR12Q9ULL5 1215 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 RSPH10B2B2RC85 870 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 MSH4O15457 936 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 IPO7O95373 1038 aaKnown RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 TUBBP07437 444 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 RSPH10BP0C881 870 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 VAV2P52735 878 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 CCDC40Q4G0X9 1142 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 PAPD7Q5XG87 772 aaKnown RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 DRC1Q96MC2 740 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 IFIH1Q9BYX4 1025 aaKnown RBP14.2□□□□□ -0.14
TRIM25-202ENST00000537230 EMILIN3Q9NT22 766 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 ATRNL1Q5VV63 1379 aa14.2□□□□□ -0.14
TRIM25-202ENST00000537230 SPDYE3A6NKU9 549 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 EML1O00423 815 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 PPIP5K2O43314 1243 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 TLR2O60603 784 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 RPS6KA5O75582 802 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 MYBL2P10244 700 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 HOXD13P35453 343 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 IRX3P78415 501 aaPredicted RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 GFPT1Q06210 699 aaPredicted RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 AP3B2Q13367 1082 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 RBM26Q5T8P6 1007 aaKnown RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 ZNF662Q6ZS27 426 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 REEP2Q9BRK0 252 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 ACBD3Q9H3P7 528 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 RGL1Q9NZL6 768 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 PCDHA13Q9Y5I0 950 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 ABCB11O95342 1321 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 SREBF1P36956 1147 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 UBXN2AP68543 259 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 KIF5AQ12840 1032 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 HGSNATQ68CP4 663 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 SAMD1Q6SPF0 538 aaPredicted RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.19□□□□□ -0.14
TRIM25-202ENST00000537230 CCDC65Q8IXS2 484 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 SLFN12Q8IYM2 578 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 GLT8D2Q9H1C3 349 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 IKZF4Q9H2S9 585 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 HPCAL4Q9UM19 191 aa14.19□□□□□ -0.14
TRIM25-202ENST00000537230 NPM3O75607 178 aaKnown RBP14.18□□□□□ -0.14
TRIM25-202ENST00000537230 RAD17O75943 681 aa14.18□□□□□ -0.14
TRIM25-202ENST00000537230 FGFR1OPO95684 399 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms