RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 OR2W6PQ8NHA6 318 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 SCFD1Q8WVM8 642 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 MTMR4Q9NYA4 1195 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 RNF14Q9UBS8 474 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 THRAP3Q9Y2W1 955 aaKnown RBP11.27□□□□□ -0.61
DDB1-204ENST00000535147 WNK3Q9BYP7 1800 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 SLURP2P0DP57 97 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 SLC9A1P19634 815 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 NR1D1P20393 614 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 SMARCA1P28370 1054 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 HPDP32754 393 aaPredicted RBP11.27□□□□□ -0.61
DDB1-204ENST00000535147 EPS15P42566 896 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 ADAM9Q13443 819 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 ASIC2Q16515 512 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 CEP85LQ5SZL2 805 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 GPBP1Q86WP2 473 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 ADGRF4Q8IZF3 695 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 SYN2Q92777 582 aaPredicted RBP11.27□□□□□ -0.61
DDB1-204ENST00000535147 AP1M1Q9BXS5 423 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
DDB1-204ENST00000535147 CD209Q9NNX6 404 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 LUC7LQ9NQ29 371 aaKnown RBP11.27□□□□□ -0.61
DDB1-204ENST00000535147 PLAAQ9Y263 795 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 LEMD3Q9Y2U8 911 aa11.27□□□□□ -0.61
DDB1-204ENST00000535147 STRCQ7RTU9 1775 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 STAT3P40763 770 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 CASP5P51878 434 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 GPSM2P81274 684 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 KCNH2Q12809 1159 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 MFSD14BQ5SR56 506 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 DPP8Q6V1X1 898 aaPredicted RBP11.26□□□□□ -0.61
DDB1-204ENST00000535147 KDM7AQ6ZMT4 941 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 LRRC27Q9C0I9 530 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 GANQ9H2C0 597 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 KCTD10Q9H3F6 313 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 BMP2KQ9NSY1 1161 aaPredicted RBP11.26□□□□□ -0.61
DDB1-204ENST00000535147 EMILIN3Q9NT22 766 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 PCDHA2Q9Y5H9 948 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 COL5A3P25940 1745 aaPredicted RBP11.26□□□□□ -0.61
DDB1-204ENST00000535147 CEP104O60308 925 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 RPS6KA4O75676 772 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 UFL1O94874 794 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 PLA2G4BP0C869 781 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 GRAPQ13588 217 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 MMS22LQ6ZRQ5 1243 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 ZNF571Q7Z3V5 609 aaPredicted RBP11.26□□□□□ -0.61
DDB1-204ENST00000535147 GRAPLQ8TC17 118 aaPredicted RBP11.26□□□□□ -0.61
DDB1-204ENST00000535147 ARHGEF1Q92888 912 aaKnown RBP11.26□□□□□ -0.61
DDB1-204ENST00000535147 CEP63Q96MT8 703 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 CNTNAP4Q9C0A0 1308 aa11.26□□□□□ -0.61
DDB1-204ENST00000535147 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 RPS6KA1Q15418 735 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 FAM98CQ17RN3 349 aaKnown RBP11.25□□□□□ -0.61
DDB1-204ENST00000535147 NAA35Q5VZE5 725 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 PPP4R3AQ6IN85 833 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L6PQ6QN14 398 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 KCTD1Q719H9 257 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 CCDC65Q8IXS2 484 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 TAF4BQ92750 862 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 ATP6V1G3Q96LB4 118 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 AIPL1Q9NZN9 384 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 CAPN7Q9Y6W3 813 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 USP17L10C9JJH3 530 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 PPP1R37O75864 691 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 KRT18P05783 430 aaKnown RBP11.25□□□□□ -0.61
DDB1-204ENST00000535147 CYP11B2P19099 503 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 NR2F2P24468 414 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 ECHS1P30084 290 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 NOVP48745 357 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 TNNC1P63316 161 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 ASPRV1Q53RT3 343 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 KCNV1Q6PIU1 500 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 IRF2BP2Q7Z5L9 587 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 MREGQ8N565 214 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 DDX47Q9H0S4 455 aaKnown RBP11.25□□□□□ -0.61
DDB1-204ENST00000535147 NEUROG2Q9H2A3 272 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 BCAS3Q9H6U6 928 aa11.25□□□□□ -0.61
DDB1-204ENST00000535147 PNMA6FA0A0J9YX94 578 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 POTEFA5A3E0 1075 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 F8W031 263 aaPredicted RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 MYO1FO00160 1098 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 MEIS1O00470 390 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 KIF4AO95239 1232 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 POTEIP0CG38 1075 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 HNRNPH1P31943 449 aaKnown RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 HDLBPQ00341 1268 aaKnown RBP11.24□□□□□ -0.61
DDB1-204ENST00000535147 ARSHQ5FYA8 562 aa11.24□□□□□ -0.61
DDB1-204ENST00000535147 FAM182BQ5T319 152 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms