RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 TFR2Q9UP52 801 aa21.02■□□□□ 0.95
SMPD1-210ENST00000534405 NAV1Q8NEY1 1877 aa21.01■□□□□ 0.95
SMPD1-210ENST00000534405 LUC7L3O95232 432 aaKnown RBP21.01■□□□□ 0.95
SMPD1-210ENST00000534405 GNAQP50148 359 aa21.01■□□□□ 0.95
SMPD1-210ENST00000534405 GRAPQ13588 217 aa21.01■□□□□ 0.95
SMPD1-210ENST00000534405 MTHFD1LQ6UB35 978 aa21.01■□□□□ 0.95
SMPD1-210ENST00000534405 GRAPLQ8TC17 118 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-210ENST00000534405 RTFDC1Q9BY42 306 aaPredicted RBP21.01■□□□□ 0.95
SMPD1-210ENST00000534405 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMPD1-210ENST00000534405 ZFATQ9P243 1243 aa21.01■□□□□ 0.95
SMPD1-210ENST00000534405 PAEPP09466 180 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 PARP1P09874 1014 aaKnown RBP21■□□□□ 0.95
SMPD1-210ENST00000534405 CDC25CP30307 473 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 CCDC170Q8IYT3 715 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 C8orf37Q96NL8 207 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 TMBIM4Q9HC24 238 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 ATP2C2O75185 946 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 ATP4AP20648 1035 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 MTA1Q13330 715 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 GKAP1Q5VSY0 366 aaPredicted RBP21■□□□□ 0.95
SMPD1-210ENST00000534405 SPATA21Q7Z572 469 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 CCDC63Q8NA47 563 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 AGAP11Q8TF27 550 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 TSC22D3Q99576 134 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 SNED1Q8TER0 1413 aa21■□□□□ 0.95
SMPD1-210ENST00000534405 B4DLN1 442 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 BAG3O95817 575 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 UBXN1Q04323 297 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 B4GALNT2Q8NHY0 566 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 DNAJC7Q99615 494 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 GDF3Q9NR23 364 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 KBTBD4Q9NVX7 518 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 LTBP4Q8N2S1 1624 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 CFAP73A6NFT4 308 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 KLRF2D3W0D1 207 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 DIAPH2O60879 1101 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 GNAT1P11488 350 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 UBA7P41226 1012 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 MAGEA8P43361 318 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 PAK2Q13177 524 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 ZNF268Q14587 947 aaPredicted RBP20.99■□□□□ 0.95
SMPD1-210ENST00000534405 VPS72Q15906 364 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 CDC37Q16543 378 aaPredicted RBP20.99■□□□□ 0.95
SMPD1-210ENST00000534405 IFT20Q8IY31 132 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 GALNT15Q8N3T1 639 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 CCSER1Q9C0I3 900 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 SLC12A4Q9UP95 1085 aa20.99■□□□□ 0.95
SMPD1-210ENST00000534405 H7C1D1 291 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 GSTO1P78417 241 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 MRPS25P82663 173 aaKnown RBP20.98■□□□□ 0.95
SMPD1-210ENST00000534405 C1QTNF12Q5T7M4 302 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 EPAS1Q99814 870 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 LACRTQ9GZZ8 138 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 FLT1P17948 1338 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 CDK5RAP2Q96SN8 1893 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 FAM153BP0C7A2 387 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 BTDP43251 543 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 FAM153CQ494X1 144 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 KCNMB3Q9NPA1 279 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 FAM153AQ9UHL3 310 aa20.98■□□□□ 0.95
SMPD1-210ENST00000534405 RCCD1A6NED2 376 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 CCT8L1PA6NM43 557 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 TRIM37O94972 964 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 FAM163BP0C2L3 166 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 IMPDH2P12268 514 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 HPDP32754 393 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-210ENST00000534405 ABL2P42684 1182 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 CDK8P49336 464 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 GPSM2P81274 684 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 CCDC178Q5BJE1 867 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 GALNT17Q6IS24 598 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 C8orf74Q6P047 294 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 NGLY1Q96IV0 654 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 ZMYND12Q9H0C1 365 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 TTC26A0AVF1 554 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 RHOBTB3O94955 611 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 USP17L2Q6R6M4 530 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 ZNF804AQ7Z570 1209 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 APLFQ8IW19 511 aaPredicted RBP20.97■□□□□ 0.95
SMPD1-210ENST00000534405 TEX9Q8N6V9 391 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 EEF2KMTQ96G04 330 aa20.97■□□□□ 0.95
SMPD1-210ENST00000534405 DDX60LQ5H9U9 1706 aaKnown RBP20.97■□□□□ 0.95
SMPD1-210ENST00000534405 CLTAP09496 248 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 RFC4P35249 363 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 NT5C2P49902 561 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 TXNRD1Q16881 649 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 WDR59Q6PJI9 974 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 LRIG3Q6UXM1 1119 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 ANKRD23Q86SG2 305 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 MB21D1Q8N884 522 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 GIMAP8Q8ND71 665 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-210ENST00000534405 ZNF507Q8TCN5 953 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 EYA3Q99504 573 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 MOV10L1Q9BXT6 1211 aaKnown RBP20.96■□□□□ 0.95
SMPD1-210ENST00000534405 TAF1DQ9H5J8 278 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-210ENST00000534405 RNF8O76064 485 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 PLCG1P19174 1290 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 CCND1P24385 295 aa20.96■□□□□ 0.95
SMPD1-210ENST00000534405 CTCFP49711 727 aaPredicted RBP20.96■□□□□ 0.95
SMPD1-210ENST00000534405 CCNG1P51959 295 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms