RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 KIAA0586Q9BVV6 1533 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ARHGEF12Q9NZN5 1544 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 A0A1W2PQ45 241 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 A0A1W2PQY0 241 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 POLR3GO15318 223 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ADCY3O60266 1144 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 OPA1O60313 960 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 EFCAB14O75071 495 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ZRANB2O95218 330 aaKnown RBP eCLIP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 RAPGEF3O95398 923 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 MBD3O95983 291 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 FUCA1P04066 466 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ZGLP1P0C6A0 271 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 PNMA6AP0CW24 399 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 TNNT1P13805 278 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 PRKCAP17252 672 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 TACR1P25103 407 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CNGA1P29973 690 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 PDE6BP35913 854 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 GDNFP39905 211 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 TNNT3P45378 269 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 GTF2A2P52657 109 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CYP4F8P98187 520 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ELF2Q15723 593 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 RGL3Q3MIN7 710 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 BMP2KLQ5H9B9 411 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 RTP2Q5QGT7 225 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CTR9Q6PD62 1173 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 KRBA2Q6ZNG9 492 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 MAMDC2Q7Z304 686 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 REXO1L1PQ8IX06 675 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 IFNL3Q8IZI9 196 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 LZTR1Q8N653 840 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ZNF513Q8N8E2 541 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 IQUBQ8NA54 791 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 SPC24Q8NBT2 197 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CCDC191Q8NCU4 936 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ABHD4Q8TB40 342 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 RTF1Q92541 710 aaKnown RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 SMARCE1Q969G3 411 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 TMEM169Q96HH4 297 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 KIRREL1Q96J84 757 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 HHIPL1Q96JK4 782 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 MCMBPQ9BTE3 642 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CXorf56Q9H5V9 222 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 C19orf44Q9H6X5 657 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ZCCHC17Q9NP64 241 aaKnown RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CLDND1Q9NY35 253 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 MARCH2Q9P0N8 246 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 IMPACTQ9P2X3 320 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 GULP1Q9UBP9 304 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 NRBP1Q9UHY1 535 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 RRP15Q9Y3B9 282 aaKnown RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 SH3BP1Q9Y3L3 701 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 RWDD3Q9Y3V2 267 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 TBX22Q9Y458 520 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 TIMM13Q9Y5L4 95 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 GPRASP1Q5JY77 1395 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 AATKQ6ZMQ8 1374 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 SUPT6HQ7KZ85 1726 aaKnown RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 CEP170Q5SW79 1584 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 A0A1B0GUL7 405 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 USP27XA6NNY8 438 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 PLD2O14939 933 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 GSTA4O15217 222 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 SCG5P05408 212 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 RNASE1P07998 156 aaKnown RBP3.71□□□□□ -1.82
CSDE1-216ENST00000534389 SRGAP2CP0DJJ0 459 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 TRHRP34981 398 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-216ENST00000534389 IRAK1P51617 712 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 NEK4P51957 841 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 SQSTM1Q13501 440 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 RABEP1Q15276 862 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 KCNMB1Q16558 191 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 FAM47CQ5HY64 1035 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 FOXB2Q5VYV0 432 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 CNNM4Q6P4Q7 775 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 KCNT2Q6UVM3 1135 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 NFXL1Q6ZNB6 911 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 UBE2R2Q712K3 238 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-216ENST00000534389 SRLQ86TD4 932 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 CHD1LQ86WJ1 897 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 ABI1Q8IZP0 508 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 LILRA2Q8N149 483 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 CCDC112Q8NEF3 446 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 FBXO18Q8NFZ0 1043 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 FRS2Q8WU20 508 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 COPS5Q92905 334 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 OSBP2Q969R2 916 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 EXOC2Q96KP1 924 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 C16orf45Q96MC5 204 aaPredicted RBP3.71□□□□□ -1.82
CSDE1-216ENST00000534389 KCNJ15Q99712 375 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 YIPF4Q9BSR8 244 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 KANSL2Q9H9L4 492 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 NCOA5Q9HCD5 579 aaKnown RBP3.71□□□□□ -1.82
CSDE1-216ENST00000534389 GPR27Q9NS67 375 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 CATSPERZQ9NTU4 200 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 ZBTB40Q9NUA8 1239 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 TMEM260Q9NX78 707 aa3.71□□□□□ -1.82
CSDE1-216ENST00000534389 SUFUQ9UMX1 484 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms