RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PCDH12Q9NPG4 1184 aa9.04□□□□□ -0.96
CASP4-212ENST00000533730 SALL4Q9UJQ4 1053 aa9.04□□□□□ -0.96
CASP4-212ENST00000533730 ZMYM6O95789 1325 aa9.04□□□□□ -0.96
CASP4-212ENST00000533730 CCDC171Q6TFL3 1326 aa9.04□□□□□ -0.96
CASP4-212ENST00000533730 SIPA1L1O43166 1804 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 ROBO3Q96MS0 1386 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 DOCK1Q14185 1865 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 CXCL11O14625 94 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 SMAD7O15105 426 aaKnown RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 DNAJC6O75061 913 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 CETPP11597 493 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 EPXP11678 715 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 TARSP26639 723 aaKnown RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 PLCD1P51178 756 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 CHMP4BP1P59074 171 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 SLC4A8Q2Y0W8 1093 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 CERKLQ49MI3 558 aaPredicted RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 CWC27Q6UX04 472 aaKnown RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 C16orf86Q6ZW13 317 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 IFNL3Q8IZI9 196 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 BHMTQ93088 406 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 SHDQ96IW2 340 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 EPB41L4AQ9HCS5 686 aaPredicted RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 CABP5Q9NP86 173 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 FANCLQ9NW38 375 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 SAGE1Q9NXZ1 904 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.03□□□□□ -0.96
CASP4-212ENST00000533730 LAMB1P07942 1786 aa9.03□□□□□ -0.96
CASP4-212ENST00000533730 ADARB2-AS1A8MUL3 147 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 SASH3O75995 380 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 HSPA1AP0DMV8 641 aaKnown RBP9.02□□□□□ -0.97
CASP4-212ENST00000533730 HSPA1BP0DMV9 641 aaKnown RBP9.02□□□□□ -0.97
CASP4-212ENST00000533730 CYP2D6P10635 497 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 CHMLP26374 656 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 SHMT1P34896 483 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 CAMK2GQ13555 558 aaPredicted RBP9.02□□□□□ -0.97
CASP4-212ENST00000533730 ABCB5Q2M3G0 1257 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 CASC1Q6TDU7 716 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 CCDC129Q6ZRS4 1044 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 CELF2-AS1Q8N7Q2 184 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 SH3TC2Q8TF17 1288 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 NKD1Q969G9 470 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 TCF12Q99081 682 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 WDR18Q9BV38 432 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 SPC25Q9HBM1 224 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 ZBTB21Q9ULJ3 1066 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 PPT2Q9UMR5 302 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 ZHX2Q9Y6X8 837 aa9.02□□□□□ -0.97
CASP4-212ENST00000533730 CCL15-CCL14A0A0B4J2E2 113 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 SHISA8B8ZZ34 492 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 CDC45O75419 566 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 MAP3K6O95382 1288 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 GH2P01242 217 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 HSPD1P10809 573 aaKnown RBP9.01□□□□□ -0.97
CASP4-212ENST00000533730 PCP11498 1178 aaKnown RBP9.01□□□□□ -0.97
CASP4-212ENST00000533730 NFKB1P19838 968 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 CDK8P49336 464 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 CTCFP49711 727 aaPredicted RBP9.01□□□□□ -0.97
CASP4-212ENST00000533730 NT5C2P49902 561 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 LMNB2Q03252 620 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 PDE4BQ07343 736 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 PPARAQ07869 468 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 CCL15Q16663 113 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 TMEM179Q6ZVK1 233 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 FASTKD5Q7L8L6 764 aaKnown RBP9.01□□□□□ -0.97
CASP4-212ENST00000533730 KRT25Q7Z3Z0 450 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
CASP4-212ENST00000533730 SVOPQ8N4V2 548 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 GALNT6Q8NCL4 622 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 EDARADDQ8WWZ3 215 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 DSCC1Q9BVC3 393 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 MKNK2Q9HBH9 465 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 CTNNA3Q9UI47 895 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 ANAPC4Q9UJX5 808 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 AFG3L2Q9Y4W6 797 aa9.01□□□□□ -0.97
CASP4-212ENST00000533730 BAZ2AQ9UIF9 1905 aaKnown RBP9.01□□□□□ -0.97
CASP4-212ENST00000533730 CYP2D7A0A087X1C5 515 aa9□□□□□ -0.97
CASP4-212ENST00000533730 A0A0G2JLL6 359 aaPredicted RBP9□□□□□ -0.97
CASP4-212ENST00000533730 C19orf81C9J6K1 198 aa9□□□□□ -0.97
CASP4-212ENST00000533730 MPHOSPH10O00566 681 aaKnown RBP9□□□□□ -0.97
CASP4-212ENST00000533730 FOXP2O15409 715 aa9□□□□□ -0.97
CASP4-212ENST00000533730 EIF5BO60841 1220 aaKnown RBP9□□□□□ -0.97
CASP4-212ENST00000533730 GDF11O95390 407 aa9□□□□□ -0.97
CASP4-212ENST00000533730 FGAP02671 866 aa9□□□□□ -0.97
CASP4-212ENST00000533730 SPP2Q13103 211 aa9□□□□□ -0.97
CASP4-212ENST00000533730 RRP1BQ14684 758 aaKnown RBP9□□□□□ -0.97
CASP4-212ENST00000533730 VPS53Q5VIR6 699 aa9□□□□□ -0.97
CASP4-212ENST00000533730 PRRT2Q7Z6L0 340 aaPredicted RBP9□□□□□ -0.97
CASP4-212ENST00000533730 ANKRD23Q86SG2 305 aa9□□□□□ -0.97
CASP4-212ENST00000533730 LILRB2Q8N423 598 aa9□□□□□ -0.97
CASP4-212ENST00000533730 FAM169BQ8N8A8 192 aa9□□□□□ -0.97
CASP4-212ENST00000533730 OR13H1Q8NG92 308 aa9□□□□□ -0.97
CASP4-212ENST00000533730 BRI3BPQ8WY22 251 aa9□□□□□ -0.97
CASP4-212ENST00000533730 DYNLL2Q96FJ2 89 aa9□□□□□ -0.97
CASP4-212ENST00000533730 DNAJC7Q99615 494 aa9□□□□□ -0.97
CASP4-212ENST00000533730 SH2D4AQ9H788 454 aa9□□□□□ -0.97
CASP4-212ENST00000533730 RNF186Q9NXI6 227 aa9□□□□□ -0.97
CASP4-212ENST00000533730 MSRB2Q9Y3D2 182 aa9□□□□□ -0.97
CASP4-212ENST00000533730 ATAD5Q96QE3 1844 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms