RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RABEP2Q9H5N1 569 aa18.27■□□□□ 0.51
CTSB-228ENST00000533455 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.51
CTSB-228ENST00000533455 ATP8B3O60423 1300 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 BHMG1C9JSJ3 638 aaPredicted RBP18.26■□□□□ 0.51
CTSB-228ENST00000533455 RAD51CO43502 376 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 GCFC2P16383 781 aaKnown RBP18.26■□□□□ 0.51
CTSB-228ENST00000533455 NR1D1P20393 614 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 GUCY2CP25092 1073 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 LSP1P33241 339 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 TNNI2P48788 182 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 RHBDL3P58872 404 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 KCTD16Q68DU8 428 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 LRIG3Q6UXM1 1119 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 SMIM5Q71RC9 77 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 FGFBP2Q9BYJ0 223 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 DDX25Q9UHL0 483 aaKnown RBP18.26■□□□□ 0.51
CTSB-228ENST00000533455 SAMM50Q9Y512 469 aa18.26■□□□□ 0.51
CTSB-228ENST00000533455 ATP1A2P50993 1020 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 EDRF1Q3B7T1 1238 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 FAM163AQ96GL9 167 aaPredicted RBP18.25■□□□□ 0.51
CTSB-228ENST00000533455 PACSIN1Q9BY11 444 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 ISCUQ9H1K1 167 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 TAF1DQ9H5J8 278 aaPredicted RBP18.25■□□□□ 0.51
CTSB-228ENST00000533455 PLCB1Q9NQ66 1216 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 GUCY2FP51841 1108 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 FAM133AQ8N9E0 248 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 TAF4BQ92750 862 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 PBKQ96KB5 322 aa18.25■□□□□ 0.51
CTSB-228ENST00000533455 NAP1L4Q99733 375 aaKnown RBP18.25■□□□□ 0.51
CTSB-228ENST00000533455 GAKO14976 1311 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 IGKV6D-41A0A0C4DH26 115 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 PNMA6FA0A0J9YX94 578 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 FRMD3A2A2Y4 597 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 ZPR1O75312 459 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 PPP1R37O75864 691 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 USP11P51784 963 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 PTGISQ16647 500 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 DPY19L2P1Q6NXN4 242 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 YTHDF3Q7Z739 585 aaKnown RBP18.24■□□□□ 0.51
CTSB-228ENST00000533455 CNPY4Q8N129 248 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 SCFD2Q8WU76 684 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 SCFD1Q8WVM8 642 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.24■□□□□ 0.51
CTSB-228ENST00000533455 YY1AP1Q9H869 796 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 TMBIM4Q9HC24 238 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 ADAMTS1Q9UHI8 967 aa18.24■□□□□ 0.51
CTSB-228ENST00000533455 PACSIN2Q9UNF0 486 aaPredicted RBP18.24■□□□□ 0.51
CTSB-228ENST00000533455 KIF4AO95239 1232 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 DNA2P51530 1060 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 KCNQ4P56696 695 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 ITGB3BPQ13352 177 aaPredicted RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 CUL1Q13616 776 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 RPS6KA1Q15418 735 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 IFI16Q16666 785 aaKnown RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 UBE2SQ16763 222 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 NAA35Q5VZE5 725 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 MICALCLQ6ZW33 695 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 SLC51AQ86UW1 340 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 ACTRT1Q8TDG2 376 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 CALR3Q96L12 384 aaKnown RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 GGA2Q9UJY4 613 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 MEFVO15553 781 aaPredicted RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 FSBPO95073 299 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 PLA2G4BP0C869 781 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 ANXA13P27216 316 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 ECHS1P30084 290 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 MDH1P40925 334 aaKnown RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 NFIXQ14938 502 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 SWT1Q5T5J6 900 aaKnown RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 NELFCDQ8IXH7 590 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 CUL5Q93034 780 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 JMJD4Q9H9V9 463 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 CD209Q9NNX6 404 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 EMILIN3Q9NT22 766 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 PCDHA12Q9UN75 941 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 PLAAQ9Y263 795 aa18.23■□□□□ 0.51
CTSB-228ENST00000533455 BZW2Q9Y6E2 419 aaKnown RBP18.23■□□□□ 0.51
CTSB-228ENST00000533455 PITPNM2Q9BZ72 1349 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 TOM1O60784 492 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 PPP1R11O60927 126 aaPredicted RBP18.22■□□□□ 0.51
CTSB-228ENST00000533455 KIAA0754O94854 1291 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 ZBTB48P10074 688 aaPredicted RBP18.22■□□□□ 0.51
CTSB-228ENST00000533455 IL1R1P14778 569 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 ERVK-9P63128 1117 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 GUCY1A3Q02108 690 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 ZNF543Q08ER8 600 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 MCTP2Q6DN12 878 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 IRF2BP2Q7Z5L9 587 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 SLF2Q8IX21 1173 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 LRRC57Q8N9N7 239 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 ZNF473Q8WTR7 871 aaKnown RBP18.22■□□□□ 0.51
CTSB-228ENST00000533455 TBC1D7Q9P0N9 293 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 NENFQ9UMX5 172 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 GREB1LQ9C091 1923 aaPredicted RBP18.22■□□□□ 0.51
CTSB-228ENST00000533455 E9PMD0 336 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 CETN3O15182 167 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 CYP11B2P19099 503 aa18.22■□□□□ 0.51
CTSB-228ENST00000533455 EPS15P42566 896 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms