RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 STK17AQ9UEE5 414 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 KIAA0586Q9BVV6 1533 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 EXOC1LA0A1B0GW35 172 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 RECQLP46063 649 aaPredicted RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 NFX1Q12986 1120 aaKnown RBP15.78■□□□□ 0.12
LRRK1-207ENST00000531270 DCAF4L1Q3SXM0 396 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 USPL1Q5W0Q7 1092 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 GALNT17Q6IS24 598 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 ARMC9Q7Z3E5 817 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 LRRC8AQ8IWT6 810 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 TAGAPQ8N103 731 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 GCNT4Q9P109 453 aa15.78■□□□□ 0.12
LRRK1-207ENST00000531270 GSPT1P15170 499 aaKnown RBP15.77■□□□□ 0.12
LRRK1-207ENST00000531270 ARL13BQ3SXY8 428 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 NDUFAF2Q8N183 169 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 SYNDIG1Q9H7V2 258 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 FOSP01100 380 aaPredicted RBP15.77■□□□□ 0.12
LRRK1-207ENST00000531270 PPARGP37231 505 aaPredicted RBP15.77■□□□□ 0.12
LRRK1-207ENST00000531270 DHX9Q08211 1270 aaKnown RBP15.77■□□□□ 0.12
LRRK1-207ENST00000531270 RAPGEF5Q92565 580 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 RPF1Q9H9Y2 349 aaKnown RBP15.77■□□□□ 0.12
LRRK1-207ENST00000531270 AFF4Q9UHB7 1163 aaKnown RBP15.77■□□□□ 0.12
LRRK1-207ENST00000531270 F8W8V4 182 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 CMA1P23946 247 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 TRIML2Q8N7C3 387 aa15.77■□□□□ 0.12
LRRK1-207ENST00000531270 POLR3AO14802 1390 aaPredicted RBP15.77■□□□□ 0.11
LRRK1-207ENST00000531270 MED23Q9ULK4 1368 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 DPYSL4O14531 572 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 MAFGO15525 162 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 ZNF445P59923 1031 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 TAF11Q15544 211 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 TRPM2O94759 1503 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 PCF11O94913 1555 aaKnown RBP15.77■□□□□ 0.11
LRRK1-207ENST00000531270 CTNND1O60716 968 aaKnown RBP15.77■□□□□ 0.11
LRRK1-207ENST00000531270 IMPG1Q17R60 797 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 FAF2Q96CS3 445 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 AP1M1Q9BXS5 423 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 WDR17Q8IZU2 1322 aa15.77■□□□□ 0.11
LRRK1-207ENST00000531270 USP14P54578 494 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ARMCX2Q7L311 632 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 OTULINQ96BN8 352 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 TRIM15Q9C019 465 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 TRPC5Q9UL62 973 aaPredicted RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ZSCAN9O15535 394 aaPredicted RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ZFYVE19Q96K21 471 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 UPF3AQ9H1J1 476 aaKnown RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 SUN2Q9UH99 717 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 URB2Q14146 1524 aaKnown RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 FGAP02671 866 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ESRRAP11474 423 aaPredicted RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ELMSAN1Q6PJG2 1045 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 GRAMD1CQ8IYS0 662 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 SLC17A8Q8NDX2 589 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 CNKSR1Q969H4 720 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 COA7Q96BR5 231 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ZNF804BA4D1E1 1349 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 CREB3O43889 395 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 FMNL1O95466 1100 aaPredicted RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 GAP43P17677 238 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 TAC1P20366 129 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 ARHGEF1Q92888 912 aaKnown RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 MRPL47Q9HD33 250 aaKnown RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 PALD1Q9ULE6 856 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 SYCE1LA8MT33 242 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 PPP6R3Q5H9R7 873 aaPredicted RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 IFT43Q96FT9 208 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 SERPINI1Q99574 410 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 WARS2Q9UGM6 360 aaKnown RBP15.76■□□□□ 0.11
LRRK1-207ENST00000531270 PCDHA4Q9UN74 947 aa15.76■□□□□ 0.11
LRRK1-207ENST00000531270 KITP10721 976 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 SCN4BQ8IWT1 228 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 ELMOD1Q8N336 334 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 DHX38Q92620 1227 aaKnown RBP15.75■□□□□ 0.11
LRRK1-207ENST00000531270 PIGSQ96S52 555 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 GTSE1Q9NYZ3 720 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 L3MBTL1Q9Y468 752 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 TRIML1Q8N9V2 468 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 SCOCQ9UIL1 159 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 IQGAP2Q13576 1575 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 PGRMC1O00264 195 aaKnown RBP15.75■□□□□ 0.11
LRRK1-207ENST00000531270 PFKFB2O60825 505 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 RAD17O75943 681 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 MYL1P05976 194 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 DYNLL1P63167 89 aaKnown RBP15.75■□□□□ 0.11
LRRK1-207ENST00000531270 MED4Q9NPJ6 270 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 KIF17Q9P2E2 1029 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 CDV3Q9UKY7 258 aaKnown RBP15.75■□□□□ 0.11
LRRK1-207ENST00000531270 ZFYVE9O95405 1425 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 TTLL1O95922 423 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 HDLBPQ00341 1268 aaKnown RBP15.75■□□□□ 0.11
LRRK1-207ENST00000531270 APBA1Q02410 837 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 RNF207Q6ZRF8 634 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 PYROXD1Q8WU10 500 aa15.75■□□□□ 0.11
LRRK1-207ENST00000531270 UBE2SQ16763 222 aa15.74■□□□□ 0.11
LRRK1-207ENST00000531270 TBCKQ8TEA7 893 aa15.74■□□□□ 0.11
LRRK1-207ENST00000531270 SH3KBP1Q96B97 665 aa15.74■□□□□ 0.11
LRRK1-207ENST00000531270 PPP1R13BQ96KQ4 1090 aa15.74■□□□□ 0.11
LRRK1-207ENST00000531270 PSMA2P25787 234 aa15.74■□□□□ 0.11
LRRK1-207ENST00000531270 CIITAP33076 1130 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms