RNA–Protein interactions for RNA: ENST00000530339.1

PCDHA4-203, Transcript of protocadherin alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA4, Length 5,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-203ENST00000530339 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 SART1O43290 800 aaKnown RBP16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 INHBAP08476 426 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 COG7P83436 770 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 KSR1Q8IVT5 923 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 CDKL2Q92772 493 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 MXD3Q9BW11 206 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 EMILIN3Q9NT22 766 aa16.71■□□□□ 0.27
PCDHA4-203ENST00000530339 GLI2P10070 1586 aa16.71■□□□□ 0.26
PCDHA4-203ENST00000530339 CYP2C19P33261 490 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 AP1M1Q9BXS5 423 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 NOP53Q9NZM5 478 aaKnown RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 SERPINB13Q9UIV8 391 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 CDC42BPAQ5VT25 1732 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 DLATP10515 647 aaKnown RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 SKIP12755 728 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 POLGP54098 1239 aaPredicted RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 PDCD7Q8N8D1 485 aaKnown RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 FBXO41Q8TF61 875 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 SCOCQ9UIL1 159 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 ASAP1Q9ULH1 1129 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 PLEKHG2Q9H7P9 1386 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 PFDN6O15212 129 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 GFPT2O94808 682 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 SERPINB6P35237 376 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 KAZNQ674X7 775 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 CYP4F22Q6NT55 531 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 GCNT4Q9P109 453 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 MAPK4P31152 587 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 CCZ1BP86790 482 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 CCZ1P86791 482 aaPredicted RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 CUL4BQ13620 913 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 IQCB1Q15051 598 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 CC2D2BQ6DHV5 1058 aa16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 MRPL47Q9HD33 250 aaKnown RBP16.7■□□□□ 0.26
PCDHA4-203ENST00000530339 YWHAGP61981 247 aaKnown RBP eCLIP16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 ADCY1Q08828 1119 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 ALX1Q15699 326 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 TSGA10IPQ3SY00 556 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 TBC1D1Q86TI0 1168 aaPredicted RBP16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 AP3B2Q13367 1082 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 DBN1Q16643 649 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 PPP1R18Q6NYC8 613 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 FAM160B2Q86V87 743 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 PIK3CAP42336 1068 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 TMED2Q15363 201 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 SURF1Q15526 300 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 POMGNT1Q8WZA1 660 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 ZNF577Q9BSK1 485 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 COG1Q8WTW3 980 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 MRPS25P82663 173 aaKnown RBP16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 PROM2Q8N271 834 aa16.69■□□□□ 0.26
PCDHA4-203ENST00000530339 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 PNMA6FA0A0J9YX94 578 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 CTIFO43310 598 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 DYNLL1P63167 89 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 WDR24Q96S15 920 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 STRBPQ96SI9 672 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 NUGGCQ68CJ6 796 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 LRRN2O75325 713 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 ZWINTO95229 277 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 RNF17Q9BXT8 1623 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 SNX1Q13596 522 aa16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 ELAC2Q9BQ52 826 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 PIH1D3Q9NQM4 214 aaKnown RBP16.68■□□□□ 0.26
PCDHA4-203ENST00000530339 PALMO75781 387 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 MMEP08473 750 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 BMP3P12645 472 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 TMTC3Q6ZXV5 915 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 TTLL11Q8NHH1 800 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 THEGQ9P2T0 379 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 TEX33O43247 280 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 SH3BP5O60239 455 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 PDE1CQ14123 709 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 RCN2Q14257 317 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 SRLQ86TD4 932 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 FAF1Q9UNN5 650 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 TARSL2A2RTX5 802 aaKnown RBP16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 FGGP02679 453 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 FAM47CQ5HY64 1035 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 PODXLO00592 558 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 NXNQ6DKJ4 435 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 MIS18BP1Q6P0N0 1132 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 SCYL2Q6P3W7 929 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 KIAA0825Q8IV33 1275 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 MB21D2Q8IYB1 491 aaPredicted RBP16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 TBK1Q9UHD2 729 aa16.67■□□□□ 0.26
PCDHA4-203ENST00000530339 USP31Q70CQ4 1352 aa16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 GMNCA6NCL1 334 aa16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 PALM3A6NDB9 673 aaPredicted RBP16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 GOLGA8CPA6NN73 597 aa16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 SGK1O00141 431 aa16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 CCDC93Q567U6 631 aa16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 FOXP4Q8IVH2 680 aaPredicted RBP16.66■□□□□ 0.26
PCDHA4-203ENST00000530339 GSPT2Q8IYD1 628 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms