RNA–Protein interactions for RNA: ENST00000530094.5

CTNND1-225, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-225ENST00000530094 MRPL47Q9HD33 250 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 ZSWIM5Q9P217 1185 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 KIAA1024Q9UPX6 916 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 A0A1B0GUA9 196 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 PDIA3P30101 505 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 SPP2Q13103 211 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 SLFN12LQ6IEE8 588 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 KIAA1841Q6NSI8 718 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 RSRC2Q7L4I2 434 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 COA7Q96BR5 231 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 FAM167AQ96KS9 214 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 CALR3Q96L12 384 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 XPO4Q9C0E2 1151 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 H7C0C1 242 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 IFNB1P01574 187 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 CIITAP33076 1130 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 PPARGP37231 505 aaPredicted RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 ATP5OP48047 213 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 PTGDRQ13258 359 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 APOA5Q6Q788 366 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 RFX6Q8HWS3 928 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 PI4K2BQ8TCG2 481 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 SH3GLB2Q9NR46 395 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 KLHL14Q9P2G3 628 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 FAN1Q9Y2M0 1017 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 HSPA6P17066 643 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 COPB2P35606 906 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 PRAMEF18Q5VWM3 479 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 SRRM1Q8IYB3 904 aaKnown RBP9.18□□□□□ -0.94
CTNND1-225ENST00000530094 RASGRP4Q8TDF6 673 aa9.18□□□□□ -0.94
CTNND1-225ENST00000530094 MYO1FO00160 1098 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 PSMD14O00487 310 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 GMPSP49915 693 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 JAK3P52333 1124 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 RBBP5Q15291 538 aaKnown RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 ZFP91Q96JP5 570 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 Q9H521 79 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 COL5A2P05997 1499 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 USP17L5A8MUK1 530 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 WDR64B1ANS9 1081 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 BTBD18B2RXH4 712 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 ARL4AP40617 200 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 Q3C1V9 767 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 PHLDB3Q6NSJ2 640 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 NLRP7Q8WX94 980 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 SLC38A10Q9HBR0 1119 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 C3P01024 1663 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 FAM83BQ5T0W9 1011 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 STRIP1Q5VSL9 837 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 PPP4R3CPQ6ZMV5 832 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 SDCCAG3Q96C92 435 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 INO80BQ9C086 356 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 ANGPTL3Q9Y5C1 460 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 BUB1BO60566 1050 aaPredicted RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 LDHAP00338 332 aaKnown RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 ERCC3P19447 782 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 CDC25BP30305 580 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 SCARF1Q14162 830 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 FAM186BQ8IYM0 893 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 RNF10Q8N5U6 811 aaKnown RBP9.17□□□□□ -0.94
CTNND1-225ENST00000530094 MIPOL1Q8TD10 442 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 CCDC127Q96BQ5 260 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 MRFAP1L1Q96HT8 127 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 PLA2G12BQ9BX93 195 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 SLC39A2Q9NP94 309 aa9.17□□□□□ -0.94
CTNND1-225ENST00000530094 INO80B-WBP1J3KQ70 363 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 TTI1O43156 1089 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ECE1P42892 770 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 COPB1P53618 953 aaKnown RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 CYP4A11Q02928 519 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 TNFAIP2Q03169 654 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 IFRD2Q12894 506 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 AP3B2Q13367 1082 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ANGEL2Q5VTE6 544 aaKnown RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 BZW1Q7L1Q6 419 aaKnown RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 CEP170P1Q96L14 293 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 CNOT6LQ96LI5 555 aaKnown RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 LMBRD1Q9NUN5 540 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 GGA3Q9NZ52 723 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ZNF148Q9UQR1 794 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 PRPF3O43395 683 aaKnown RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ELP3Q9H9T3 547 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 MID2Q9UJV3 735 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 JRKLQ9Y4A0 524 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 PNMA6FA0A0J9YX94 578 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ELF1P32519 619 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 SCRN1Q12765 414 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ARL13BQ3SXY8 428 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 FAM71BQ8TC56 605 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ZC3H15Q8WU90 426 aaKnown RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 APOL6Q9BWW8 343 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.16□□□□□ -0.94
CTNND1-225ENST00000530094 PSMD6Q15008 389 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 SLC39A14Q15043 492 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 LONRF3Q496Y0 759 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 C9orf131Q5VYM1 1079 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 NXNQ6DKJ4 435 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 ATG9AQ7Z3C6 839 aa9.16□□□□□ -0.94
CTNND1-225ENST00000530094 FBXO18Q8NFZ0 1043 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms