RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CTTNQ14247 550 aaKnown RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 BECN1Q14457 450 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 MFSD10Q14728 455 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 IL17AQ16552 155 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CALCRLQ16602 461 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 DGKDQ16760 1214 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 KIAA0753Q2KHM9 967 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 Q4G0T1 1027 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PPP4R3AQ6IN85 833 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 GDF6Q6KF10 455 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 KCNV1Q6PIU1 500 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 METTL7BQ6UX53 244 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 NIPA1Q7RTP0 329 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 MIER3Q7Z3K6 550 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CCDC60Q8IWA6 550 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 CKAP2LQ8IYA6 745 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 C4orf32Q8N8J7 132 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PCSK9Q8NBP7 692 aaKnown RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 BANK1Q8NDB2 785 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PPTC7Q8NI37 304 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 SEPT1Q8WYJ6 367 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 GLG1Q92896 1179 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 SLC5A5Q92911 643 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 DYDC2Q96IM9 177 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 GLT1D1Q96MS3 346 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 MBOAT7Q96N66 472 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PPP1R16BQ96T49 567 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PLIN2Q99541 437 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 C16orf70Q9BSU1 422 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 MTG1Q9BT17 334 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TEKT3Q9BXF9 490 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TTC12Q9H892 705 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 KCNMB3Q9NPA1 279 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PRDM5Q9NQX1 630 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 BMP2KQ9NSY1 1161 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TRMT13Q9NUP7 481 aaKnown RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 SETD4Q9NVD3 440 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 RGL1Q9NZL6 768 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 WRAP73Q9P2S5 460 aaPredicted RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 HDAC6Q9UBN7 1215 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 GABBR1Q9UBS5 961 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 TCEAL9Q9UHQ7 104 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 NOL7Q9UMY1 257 aaKnown RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 PHF24Q9UPV7 400 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 ZDHHC9Q9Y397 364 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 Q9Y3F1 56 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 MYH6P13533 1939 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNFX1Q9P2E3 1918 aaKnown RBP5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 ELP1O95163 1332 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 UMODL1Q5DID0 1318 aa5.2□□□□□ -1.58
CHMP4A-202ENST00000524955 MCM3APO60318 1980 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 A0A0U1RQG5 324 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 TRIM43BA6NCK2 446 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 MOXD2PA6NHM9 499 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 H3BRB1 525 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ARVCFO00192 962 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 MAFGO15525 162 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF862O60290 1169 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZEB2O60315 1214 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 EVI5O60447 810 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 B4GALT4O60513 344 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 BAG4O95429 457 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 F13A1P00488 732 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 OR52Z1P0C646 297 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SUPT20HL2P0C7V6 817 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SMIM10L2AP0DMW4 78 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SMIM10L2BP0DMW5 78 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZSCAN22P10073 491 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 GCFC2P16383 781 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ATP4AP20648 1035 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 PDCP20941 246 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ITGB8P26012 769 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 MARCKSP29966 332 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ANP32AP39687 249 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 STAT5BP51692 787 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SETQ01105 290 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SPIRE1Q08AE8 756 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 PTGDRQ13258 359 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SF3A1Q15459 793 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZRSR1Q15695 479 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 BRDTQ58F21 947 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SPECC1Q5M775 1068 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 PLA2G4FQ68DD2 849 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 MIS18BP1Q6P0N0 1132 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 PDXDC2PQ6P474 469 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ABHD15Q6UXT9 468 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 FAM177A1Q8N128 213 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 C7orf31Q8N865 590 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF579Q8NAF0 562 aaKnown RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ANKLE1Q8NAG6 615 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 IL27Q8NEV9 243 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 WNT8BQ93098 351 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 EMID1Q96A84 441 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 TRIM43Q96BQ3 446 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 CDHR1Q96JP9 859 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 ZNF668Q96K58 619 aaPredicted RBP5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 MTMR9Q96QG7 549 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 USP28Q96RU2 1077 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 SENP7Q9BQF6 1050 aa5.19□□□□□ -1.58
CHMP4A-202ENST00000524955 TSEN34Q9BSV6 310 aaKnown RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms