RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 TACO1Q9BSH4 297 aaKnown RBP15.01□□□□□ -0.01
SYNPO-205ENST00000522122 VCX3BQ9H321 246 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 SENP2Q9HC62 589 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 CAPN11Q9UMQ6 739 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 TCP10L2B9ZVM9 353 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 TNFAIP1Q13829 316 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 GEN1Q17RS7 908 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 ADAMTS1Q9UHI8 967 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 ATP8A1Q9Y2Q0 1164 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 EIF3CLB5ME19 914 aaKnown RBP15.01□□□□□ -0.01
SYNPO-205ENST00000522122 BBOX1O75936 387 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 PLA2G4BP0C869 781 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 IFNAR2P48551 515 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 PLTPP55058 493 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 RILPQ96NA2 401 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 EIF3CQ99613 913 aaKnown RBP15.01□□□□□ -0.01
SYNPO-205ENST00000522122 WDR11Q9BZH6 1224 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 TTC26A0AVF1 554 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 PNMA2Q9UL42 364 aa15.01□□□□□ -0.01
SYNPO-205ENST00000522122 UBR1Q8IWV7 1749 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 CLTAP09496 248 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 NNTQ13423 1086 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 PPP2R5DQ14738 602 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 SPICE1Q8N0Z3 855 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 GABPB2Q8TAK5 448 aaPredicted RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 EPB41L4AQ9HCS5 686 aaPredicted RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 ATP1A1P05023 1023 aaKnown RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 POLR2BP30876 1174 aaKnown RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 DHX9Q08211 1270 aaKnown RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 BFSP1Q12934 665 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 CAPN12Q6ZSI9 719 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 SRLQ86TD4 932 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 SYNE4Q8N205 404 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 CCDC197Q8NCU1 140 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 WHAMMQ8TF30 809 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 CCPG1Q9ULG6 757 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 LRRN2O75325 713 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 ECM2O94769 699 aaPredicted RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 GFPT2O94808 682 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 SLC8A1P32418 973 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 TMED8Q6PL24 325 aaPredicted RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 RAB3IPQ96QF0 476 aaPredicted RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 NACC1Q96RE7 527 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 GCNT4Q9P109 453 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 IVNS1ABPQ9Y6Y0 642 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 MEIS1O00470 390 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 SUN1O94901 812 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 MAN1A1P33908 653 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 CDK8P49336 464 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 CASP7P55210 303 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 KCNB1Q14721 858 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 RSRC2Q7L4I2 434 aaKnown RBP15□□□□□ -0.01
SYNPO-205ENST00000522122 ZBTB8OSQ8IWT0 167 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 VCXQ9H320 206 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 HDAC6Q9UBN7 1215 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 PTPN22Q9Y2R2 807 aa15□□□□□ -0.01
SYNPO-205ENST00000522122 GYPCP04921 128 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 HSPA6P17066 643 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 SLC7A5Q01650 507 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 ALKBH5Q6P6C2 394 aaKnown RBP14.99□□□□□ -0.01
SYNPO-205ENST00000522122 TRIM65Q6PJ69 517 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 ZNF577Q9BSK1 485 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNPO-205ENST00000522122 FUT8Q9BYC5 575 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 ODF2LQ9ULJ1 636 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 CACNA1FO60840 1977 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 PIK3C2AO00443 1686 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 HNRNPDLO14979 420 aaKnown RBP14.99□□□□□ -0.01
SYNPO-205ENST00000522122 FXR1P51114 621 aaKnown RBP eCLIP14.99□□□□□ -0.01
SYNPO-205ENST00000522122 LRRN4CLQ8ND94 238 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 COG1Q8WTW3 980 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 ZNF653Q96CK0 615 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 PSMD14O00487 310 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 PRKG1Q13976 671 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 UNC13DQ70J99 1090 aa14.99□□□□□ -0.01
SYNPO-205ENST00000522122 MRPS9P82933 396 aaKnown RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 BRDTQ58F21 947 aaPredicted RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 TMC4Q7Z404 712 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 MICAL1Q8TDZ2 1067 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 TPD52P55327 224 aaPredicted RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 UBXN2AP68543 259 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 LMNB2Q03252 620 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 UBE2SQ16763 222 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 BSPRYQ5W0U4 402 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 CLEC4GQ6UXB4 293 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 PPP4R3CPQ6ZMV5 832 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 PHLDB2Q86SQ0 1253 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 TADA2BQ86TJ2 420 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 SLC17A8Q8NDX2 589 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 SLIT3O75094 1523 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 PNMA6FA0A0J9YX94 578 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 LRRIQ4A6NIV6 560 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 PPP1R3GB7ZBB8 358 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 CTNND1O60716 968 aaKnown RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 GMNNO75496 209 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 STAM2O75886 525 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 RNF8O76064 485 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 BMP3P12645 472 aa14.98□□□□□ -0.01
SYNPO-205ENST00000522122 SARNPP82979 210 aaKnown RBP14.98□□□□□ -0.01
SYNPO-205ENST00000522122 TBX2Q13207 712 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms