RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 SLC7A14Q8TBB6 771 aa7.16□□□□□ -1.26
PTPN12-214ENST00000520947 DDX1Q92499 740 aaKnown RBP7.16□□□□□ -1.26
PTPN12-214ENST00000520947 RELTQ969Z4 430 aa7.16□□□□□ -1.26
PTPN12-214ENST00000520947 RTEL1Q9NZ71 1219 aa7.16□□□□□ -1.26
PTPN12-214ENST00000520947 CBLCQ9ULV8 474 aa7.16□□□□□ -1.26
PTPN12-214ENST00000520947 MRPL42Q9Y6G3 142 aaKnown RBP7.16□□□□□ -1.26
PTPN12-214ENST00000520947 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.15□□□□□ -1.26
PTPN12-214ENST00000520947 NOBOXO60393 691 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 RASGRP1O95267 797 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 PDE6AP16499 860 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 FAHP16930 419 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 NAT1P18440 290 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 RTP5Q14D33 572 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 RGL3Q3MIN7 710 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 PRR31Q5SQ13 230 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 VASNQ6EMK4 673 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 OSTM1Q86WC4 334 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 PROSER1Q86XN7 944 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 PTRH1Q86Y79 214 aaKnown RBP7.15□□□□□ -1.26
PTPN12-214ENST00000520947 TMEM209Q96SK2 561 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 SFMBT1Q9UHJ3 866 aa7.15□□□□□ -1.26
PTPN12-214ENST00000520947 CCDC66A2RUB6 948 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 KCNK3O14649 394 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 EFCAB14O75071 495 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 MLLT6P55198 1093 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-214ENST00000520947 GPR19Q15760 415 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 C16orf59Q7L2K0 433 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 FRMD5Q7Z6J6 570 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 FERMT3Q86UX7 667 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 RNPC3Q96LT9 517 aaKnown RBP7.14□□□□□ -1.27
PTPN12-214ENST00000520947 MAGEB10Q96LZ2 347 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-214ENST00000520947 KANSL2Q9H9L4 492 aa7.14□□□□□ -1.27
PTPN12-214ENST00000520947 TMA7Q9Y2S6 64 aaKnown RBP7.14□□□□□ -1.27
PTPN12-214ENST00000520947 ACOT7O00154 380 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 WNT9AO14904 365 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 PRICKLE3O43900 615 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-214ENST00000520947 AMY2AP04746 511 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 APPP05067 770 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 CKMP06732 381 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 ZNF28P17035 718 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 AMY2BP19961 511 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 IL13P35225 146 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 EPHA5P54756 1037 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 JAM2P57087 298 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 CRY1Q16526 586 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 FAM47CQ5HY64 1035 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 BTBD8Q5XKL5 378 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 CD276Q5ZPR3 534 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 EP400NLQ6ZTU2 488 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 BRAPQ7Z569 592 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 CISD2Q8N5K1 135 aaKnown RBP7.13□□□□□ -1.27
PTPN12-214ENST00000520947 TXNDC5Q8NBS9 432 aaKnown RBP7.13□□□□□ -1.27
PTPN12-214ENST00000520947 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 L2HGDHQ9H9P8 463 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 RIC8BQ9NVN3 520 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 HSPBP1Q9NZL4 362 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 SRPK3Q9UPE1 567 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 COQ6Q9Y2Z9 468 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 DUSP10Q9Y6W6 482 aa7.13□□□□□ -1.27
PTPN12-214ENST00000520947 CADPSQ9ULU8 1353 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 CCDC163A0A0D9SF12 145 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 MAN2B1O00754 1011 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 GSTA4O15217 222 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 FOXD2O60548 495 aaPredicted RBP7.12□□□□□ -1.27
PTPN12-214ENST00000520947 CYP1A1P04798 512 aaPredicted RBP7.12□□□□□ -1.27
PTPN12-214ENST00000520947 CNR2P34972 360 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 GLRBP48167 497 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 SKIDA1Q1XH10 827 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 TRMT10BQ6PF06 316 aaKnown RBP7.12□□□□□ -1.27
PTPN12-214ENST00000520947 FGD2Q7Z6J4 655 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 NLGN4XQ8N0W4 816 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 FAM177A1Q8N128 213 aaPredicted RBP7.12□□□□□ -1.27
PTPN12-214ENST00000520947 SH3TC2Q8TF17 1288 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 SCLYQ96I15 445 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 TEPSINQ96N21 525 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 NCOA5Q9HCD5 579 aaKnown RBP7.12□□□□□ -1.27
PTPN12-214ENST00000520947 DLL4Q9NR61 685 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 ATP23Q9Y6H3 246 aa7.12□□□□□ -1.27
PTPN12-214ENST00000520947 FAM90A27PA6NNH2 459 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 CYP7B1O75881 506 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 RAPGEF3O95398 923 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 ENO2P09104 434 aaPredicted RBP7.11□□□□□ -1.27
PTPN12-214ENST00000520947 PTPN1P18031 435 aaKnown RBP7.11□□□□□ -1.27
PTPN12-214ENST00000520947 PFKPQ01813 784 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 SQSTM1Q13501 440 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 FAM26FQ5R3K3 315 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 UBXN11Q5T124 520 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 SDE2Q6IQ49 451 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 DTX3Q8N9I9 347 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 ZCCHC14Q8WYQ9 949 aaKnown RBP7.11□□□□□ -1.27
PTPN12-214ENST00000520947 WRNIP1Q96S55 665 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 MRPL4Q9BYD3 311 aaKnown RBP7.11□□□□□ -1.27
PTPN12-214ENST00000520947 KRTAP4-11Q9BYQ6 195 aa7.11□□□□□ -1.27
PTPN12-214ENST00000520947 NCANO14594 1321 aa7.1□□□□□ -1.27
PTPN12-214ENST00000520947 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.1□□□□□ -1.27
PTPN12-214ENST00000520947 B8ZZF3 427 aa7.1□□□□□ -1.27
PTPN12-214ENST00000520947 ZNF561-AS1K7EIQ3 104 aa7.1□□□□□ -1.27
PTPN12-214ENST00000520947 PRRG2O14669 202 aa7.1□□□□□ -1.27
PTPN12-214ENST00000520947 BDH2Q9BUT1 245 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms