RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 LONRF3Q496Y0 759 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 C1orf53Q5VUE5 145 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 CNNM4Q6P4Q7 775 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 RNF207Q6ZRF8 634 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 CPXCR1Q8N123 301 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 HAS1Q92839 578 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 CALML4Q96GE6 196 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 CDHR1Q96JP9 859 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 GSDMAQ96QA5 445 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 IWS1Q96ST2 819 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 WDR11Q9BZH6 1224 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 LRRC27Q9C0I9 530 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 NAT10Q9H0A0 1025 aaKnown RBP10.23□□□□□ -0.77
NR1I3-228ENST00000511676 TTC12Q9H892 705 aaPredicted RBP10.23□□□□□ -0.77
NR1I3-228ENST00000511676 LRWD1Q9UFC0 647 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 ZMYND8Q9ULU4 1186 aaPredicted RBP10.23□□□□□ -0.77
NR1I3-228ENST00000511676 PCDHA12Q9UN75 941 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 MROH7Q68CQ1 1323 aa10.23□□□□□ -0.77
NR1I3-228ENST00000511676 MARCH6O60337 910 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 RARBP10826 455 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 HOXA13P31271 388 aaPredicted RBP10.22□□□□□ -0.77
NR1I3-228ENST00000511676 ZNF76P36508 570 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 STAT6P42226 847 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 AMPD3Q01432 767 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 PPP2R5CQ13362 524 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 MUM1L1Q5H9M0 696 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 KRT79Q5XKE5 535 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 LHX8Q68G74 356 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 CABP7Q86V35 215 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 FCHSD1Q86WN1 690 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 FAM200AQ8TCP9 573 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 NEK9Q8TD19 979 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 NSUN6Q8TEA1 469 aaKnown RBP10.22□□□□□ -0.77
NR1I3-228ENST00000511676 SLC5A5Q92911 643 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 GPRASP2Q96D09 838 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 EPSTI1Q96J88 318 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 MPHOSPH6Q99547 160 aaKnown RBP10.22□□□□□ -0.77
NR1I3-228ENST00000511676 BPIFA3Q9BQP9 254 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 MXRA8Q9BRK3 442 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 GRPEL1Q9HAV7 217 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 CYP39A1Q9NYL5 469 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 UBIAD1Q9Y5Z9 338 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 MRVI1Q9Y6F6 885 aa10.22□□□□□ -0.77
NR1I3-228ENST00000511676 FAM86B1E9PN63 330 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 FAM86B2P0C5J1 330 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 CCND2P30279 289 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 TXKP42681 527 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 SARSP49591 514 aaKnown RBP10.21□□□□□ -0.77
NR1I3-228ENST00000511676 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 KCTD2Q14681 263 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 PGM5Q15124 567 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 CAMK4Q16566 473 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 Q3C1V9 767 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 PRR16Q569H4 304 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 RRAGBQ5VZM2 374 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 PDXDC2PQ6P474 469 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 USP49Q70CQ1 688 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 GAS2L3Q86XJ1 694 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 RDM1Q8NG50 284 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 DIS3LQ8TF46 1054 aaKnown RBP10.21□□□□□ -0.77
NR1I3-228ENST00000511676 RMDN3Q96TC7 470 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 PDCD2LQ9BRP1 358 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 TSEN34Q9BSV6 310 aaKnown RBP10.21□□□□□ -0.77
NR1I3-228ENST00000511676 MTIF3Q9H2K0 278 aaKnown RBP10.21□□□□□ -0.77
NR1I3-228ENST00000511676 PXMP2Q9NR77 195 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 TBC1D22BQ9NU19 505 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 KBTBD4Q9NVX7 518 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 RMND1Q9NWS8 449 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 MTMR10Q9NXD2 777 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
NR1I3-228ENST00000511676 DACH1Q9UI36 760 aa10.21□□□□□ -0.77
NR1I3-228ENST00000511676 MYH7BA7E2Y1 1941 aa10.21□□□□□ -0.78
NR1I3-228ENST00000511676 A0A087X0B3 334 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 DCDC2CA8MYV0 355 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 MSH4O15457 936 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 GTPBP6O43824 516 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-228ENST00000511676 PSMD10O75832 226 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 RPA1P27694 616 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 PPP1R2P41236 205 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 TECP42680 631 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 SMAD3P84022 425 aaKnown RBP10.2□□□□□ -0.78
NR1I3-228ENST00000511676 TMEM119Q4V9L6 283 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 B3GNT9Q6UX72 402 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 SLC30A10Q6XR72 485 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 NLRX1Q86UT6 975 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 VSIG10LQ86VR7 867 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 PLA2G4DQ86XP0 818 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 CKAP2LQ8IYA6 745 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 MLKLQ8NB16 471 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 PCSK9Q8NBP7 692 aaKnown RBP10.2□□□□□ -0.78
NR1I3-228ENST00000511676 TBC1D5Q92609 795 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 SMARCE1Q969G3 411 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 DHX58Q96C10 678 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 CDK5RAP3Q96JB5 506 aa10.2□□□□□ -0.78
NR1I3-228ENST00000511676 INPP4AQ96PE3 977 aaPredicted RBP10.2□□□□□ -0.78
NR1I3-228ENST00000511676 MMTAG2Q9BU76 263 aaKnown RBP10.2□□□□□ -0.78
NR1I3-228ENST00000511676 POLR3CQ9BUI4 534 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms