RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 CEP72Q9P209 647 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 RAD51CO43502 376 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 PRPHP41219 470 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 SNCBQ16143 134 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 RAB17Q9H0T7 212 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 SEMA6BQ9H3T3 888 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 MEFVO15553 781 aaPredicted RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 GLI1P08151 1106 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 POLD1P28340 1107 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 HNRNPH1P31943 449 aaKnown RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 ZNF473Q8WTR7 871 aaKnown RBP16.26■□□□□ 0.19
USP38-202ENST00000510377 MTMR8Q96EF0 704 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 FBXL5Q9UKA1 691 aa16.26■□□□□ 0.19
USP38-202ENST00000510377 USP17L15C9J2P7 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L13C9JLJ4 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L11C9JVI0 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L18D6R9N7 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L22D6RA61 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L17D6RBQ6 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L19D6RCP7 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L20D6RJB6 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 STXBP3O00186 592 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L24Q0WX57 530 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 ZKSCAN8Q15776 578 aaPredicted RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 USP17L6PQ6QN14 398 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 IRF2BP1Q8IU81 584 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 RAD54LQ92698 747 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 ZC3H12CQ9C0D7 883 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 GCNT4Q9P109 453 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 KCNQ2O43526 872 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 AFPP02771 609 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 FAM153BP0C7A2 387 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 EEF2P13639 858 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 STAT3P40763 770 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 HDLBPQ00341 1268 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 FAM153CQ494X1 144 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 GLE1Q53GS7 698 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 APTXQ7Z2E3 356 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 NAP1L3Q99457 506 aaPredicted RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 PACSIN1Q9BY11 444 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 DNAJC17Q9NVM6 304 aaKnown RBP16.25■□□□□ 0.19
USP38-202ENST00000510377 FAM153AQ9UHL3 310 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 GGA1Q9UJY5 639 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 MTUS1Q9ULD2 1270 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 ODF2LQ9ULJ1 636 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 BCS1LQ9Y276 419 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 SNX24Q9Y343 169 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 EPHB6O15197 1021 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 C12orf60Q5U649 245 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 KBTBD4Q9NVX7 518 aa16.25■□□□□ 0.19
USP38-202ENST00000510377 RSRC1Q96IZ7 334 aaKnown RBP16.24■□□□□ 0.19
USP38-202ENST00000510377 ERGIC2Q96RQ1 377 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 INTS9Q9NV88 658 aaKnown RBP16.24■□□□□ 0.19
USP38-202ENST00000510377 ANAPC4Q9UJX5 808 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 DAAM1Q9Y4D1 1078 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 KDM3AQ9Y4C1 1321 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 ECM2O94769 699 aaPredicted RBP16.24■□□□□ 0.19
USP38-202ENST00000510377 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
USP38-202ENST00000510377 MESDQ14696 234 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 GSTA5Q7RTV2 222 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 RNF10Q8N5U6 811 aaKnown RBP16.24■□□□□ 0.19
USP38-202ENST00000510377 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 TAF1DQ9H5J8 278 aaPredicted RBP16.24■□□□□ 0.19
USP38-202ENST00000510377 RGPD1P0DJD0 1748 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 CFBP00751 764 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 OTUD6AQ7L8S5 288 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 CREG2Q8IUH2 290 aa16.24■□□□□ 0.19
USP38-202ENST00000510377 PVALEFA0A1B0GWK0 134 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 UBXN2AP68543 259 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 PAXIP1Q6ZW49 1069 aaPredicted RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 FMO2Q99518 471 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 MLXIPLQ9NP71 852 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 A0A087X0T9 212 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 A0A1B0GUA9 196 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 POTEFA5A3E0 1075 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 GMNCA6NCL1 334 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 FAM228BP0C875 321 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 MDH1P40925 334 aaKnown RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 POTEGQ6S5H5 508 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 POTEEQ6S8J3 1075 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 N4BP2L2Q92802 583 aaPredicted RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 STMN4Q9H169 189 aaPredicted RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 SART1O43290 800 aaKnown RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 UBL4BQ8N7F7 174 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 CCDC197Q8NCU1 140 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 CASKIN2Q8WXE0 1202 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 GJD4Q96KN9 370 aaPredicted RBP16.23■□□□□ 0.19
USP38-202ENST00000510377 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
USP38-202ENST00000510377 ADAMTS3O15072 1205 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 CCDC63Q8NA47 563 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 ELAC2Q9BQ52 826 aaKnown RBP16.22■□□□□ 0.19
USP38-202ENST00000510377 USP40Q9NVE5 1235 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 GGT7Q9UJ14 662 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 PHF20L1A8MW92 1017 aa16.22■□□□□ 0.19
USP38-202ENST00000510377 GUCY2CP25092 1073 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms