RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 ANAPC16Q96DE5 110 aa5.33□□□□□ -1.56
SMARCA5-202ENST00000508573 TM9SF2Q99805 663 aa5.33□□□□□ -1.56
SMARCA5-202ENST00000508573 SPATA6Q9NWH7 488 aaPredicted RBP5.33□□□□□ -1.56
SMARCA5-202ENST00000508573 A0A087WZG4 1122 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 DYTNA2CJ06 578 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 PPP1R11O60927 126 aaPredicted RBP5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 RASGRP1O95267 797 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 ASMTLO95671 621 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 ITGB3P05106 788 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 STAT3P40763 770 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 RBM10P98175 930 aaKnown RBP5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 IFRD2Q12894 506 aaPredicted RBP5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 TCEA2Q15560 299 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 TM4SF20Q53R12 229 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 C2orf27AQ580R0 203 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 CPNE8Q86YQ8 564 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 JMYQ8N9B5 988 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 ADCY4Q8NFM4 1077 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 CHAC2Q8WUX2 184 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 RSPH9Q9H1X1 276 aaPredicted RBP5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 ST7Q9NRC1 585 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 SMPD4Q9NXE4 827 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 ZNF69Q9UC07 566 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 STRIP2Q9ULQ0 834 aa5.32□□□□□ -1.56
SMARCA5-202ENST00000508573 A0A087X0B3 334 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 SMAD7O15105 426 aaKnown RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 PDPK1O15530 556 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 PRPF3O43395 683 aaKnown RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 SLC26A4O43511 780 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 MYL3P08590 195 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 VDRP11473 427 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 MYCLP1P12525 358 aaPredicted RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 ADAM17P78536 824 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 SMAD4Q13485 552 aaKnown RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 RASGRF1Q13972 1273 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 DPY19L1Q2PZI1 675 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 ADAT2Q7Z6V5 191 aaKnown RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 TTC30BQ8N4P2 665 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 TAB3Q8N5C8 712 aaPredicted RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 UBR7Q8N806 425 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 ZBTB8AQ96BR9 441 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 TSPAN17Q96FV3 270 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 PEX11GQ96HA9 241 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 MCMBPQ9BTE3 642 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 ASPSCR1Q9BZE9 553 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 NTMQ9P121 344 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 NUDT5Q9UKK9 219 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 R3HCC1Q9Y3T6 440 aaKnown RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 DAAM1Q9Y4D1 1078 aa5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 CTDP1Q9Y5B0 961 aaPredicted RBP5.31□□□□□ -1.56
SMARCA5-202ENST00000508573 KATNA1O75449 491 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 RNASEH2AO75792 299 aaKnown RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 F2P00734 622 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 GUCY2CP25092 1073 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 GUCY2FP51841 1108 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 FAM193AP78312 1265 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 ZXDAP98168 799 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 CACNB2Q08289 660 aaPredicted RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 SLC9A5Q14940 896 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 LONRF1Q17RB8 773 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 CCDC93Q567U6 631 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 EEF1DP3Q658K8 133 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 RCSD1Q6JBY9 416 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 ZNF761Q86XN6 746 aaPredicted RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 CCDC89Q8N998 374 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 THAP3Q8WTV1 239 aaPredicted RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 DDX11Q96FC9 970 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 LOXL4Q96JB6 756 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 RBM15Q96T37 977 aaKnown RBP eCLIP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 RTFDC1Q9BY42 306 aaPredicted RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 CAAP1Q9H8G2 361 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 NGRNQ9NPE2 291 aaKnown RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 LUZP4Q9P127 313 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 GULP1Q9UBP9 304 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 ZNF214Q9UL59 606 aaPredicted RBP5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 PPT2Q9UMR5 302 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 PLAAQ9Y263 795 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 FRMD4BQ9Y2L6 1034 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 PTCH2Q9Y6C5 1203 aa5.3□□□□□ -1.56
SMARCA5-202ENST00000508573 LTBP3Q9NS15 1303 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 C2orf71A6NGG8 1288 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 TCERG1O14776 1098 aaKnown RBP5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 AURKAO14965 403 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 ZBTB7AO95365 584 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 POLD1P28340 1107 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 SEPHS1P49903 392 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 NEK2P51955 445 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 TERF1P54274 439 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 MLC1Q15049 377 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 DDR2Q16832 855 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 GNPTABQ3T906 1256 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 C1QTNF12Q5T7M4 302 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 IL31Q6EBC2 164 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 CCDC70Q6NSX1 233 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 HDGFL2Q7Z4V5 671 aaPredicted RBP5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 SUGP1Q8IWZ8 645 aaKnown RBP5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 TCEAL8Q8IYN2 117 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 FAM169BQ8N8A8 192 aa5.29□□□□□ -1.56
SMARCA5-202ENST00000508573 FBXO41Q8TF61 875 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms