RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 F8W031 263 aaPredicted RBP4.81□□□□□ -1.64
LSM6-205ENST00000507449 KRIT1O00522 736 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 HGSO14964 777 aaPredicted RBP4.81□□□□□ -1.64
LSM6-205ENST00000507449 ZEB2O60315 1214 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 BRINP1O60477 761 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 KATNA1O75449 491 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 KRT37O76014 449 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 FARP2O94887 1054 aaPredicted RBP4.81□□□□□ -1.64
LSM6-205ENST00000507449 PMLP29590 882 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 ARL4AP40617 200 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 AFMP43652 599 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 IL2P60568 153 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 TMPRSS15P98073 1019 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 RBM10P98175 930 aaKnown RBP4.81□□□□□ -1.64
LSM6-205ENST00000507449 TUSC3Q13454 348 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 ARHGAP44Q17R89 818 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 CYP4F22Q6NT55 531 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 PAQR3Q6TCH7 311 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 RPTNQ6XPR3 784 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 KCTD1Q719H9 257 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 ATG4DQ86TL0 474 aaPredicted RBP4.81□□□□□ -1.64
LSM6-205ENST00000507449 CABP7Q86V35 215 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 ARRDC4Q8NCT1 418 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 CLEC4DQ8WXI8 215 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 SEC14L1Q92503 715 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 DLG3Q92796 817 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 PDGFDQ9GZP0 370 aaPredicted RBP4.81□□□□□ -1.64
LSM6-205ENST00000507449 SMOC1Q9H4F8 434 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 VTA1Q9NP79 307 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 MYOTQ9UBF9 498 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 ZKSCAN5Q9Y2L8 839 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 B3GALT1Q9Y5Z6 326 aa4.81□□□□□ -1.64
LSM6-205ENST00000507449 ACOT7O00154 380 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 SCDO00767 359 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 CLASP2O75122 1294 aaKnown RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 PAPLNO95428 1278 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 C4BPAP04003 597 aaKnown RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 THBS2P35442 1172 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 GUCY2FP51841 1108 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 MTMR1Q13613 665 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 PLEKHN1Q494U1 663 aaPredicted RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 ADGRF1Q5T601 910 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 ZNF648Q5T619 568 aaPredicted RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 RNF219Q5W0B1 726 aaPredicted RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 NECAB2Q7Z6G3 386 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 MILR1Q7Z6M3 343 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 SPATS2Q86XZ4 545 aaKnown RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 EFHBQ8N7U6 833 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 PHOSPHO1Q8TCT1 267 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 ELF4Q99607 663 aaPredicted RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 ASPSCR1Q9BZE9 553 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 IRF2BPLQ9H1B7 796 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 MS4A5Q9H3V2 200 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 BCAS3Q9H6U6 928 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 SLC5A4Q9NY91 659 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 KLHL42Q9P2K6 505 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 APOBEC2Q9Y235 224 aaKnown RBP4.8□□□□□ -1.64
LSM6-205ENST00000507449 PCDHB4Q9Y5E5 795 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 ATP23Q9Y6H3 246 aa4.8□□□□□ -1.64
LSM6-205ENST00000507449 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 RASSF10A6NK89 507 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 ALG1L2C9J202 215 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 PRKD3O94806 890 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 HMGB1P09429 215 aaKnown RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 CPEP16870 476 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 PTPN1P18031 435 aaKnown RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 ITGB5P18084 799 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 SLC9A1P19634 815 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 PTX3P26022 381 aaPredicted RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 KPNA1P52294 538 aaPredicted RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 PRR5P85299 388 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 GRIN1Q05586 938 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 SART3Q15020 963 aaKnown RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 RAB3GAP1Q15042 981 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 CHRNA2Q15822 529 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 ATP13A4Q4VNC1 1196 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 ESRP1Q6NXG1 681 aaKnown RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 FERMT3Q86UX7 667 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 KIAA1958Q8N8K9 716 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 TSPAN17Q96FV3 270 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 AP5M1Q9H0R1 490 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 CCDC8Q9H0W5 538 aaPredicted RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 ZMAT4Q9H898 229 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 THRAP3Q9Y2W1 955 aaKnown RBP4.79□□□□□ -1.64
LSM6-205ENST00000507449 SPO11Q9Y5K1 396 aa4.79□□□□□ -1.64
LSM6-205ENST00000507449 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 ZNF503-AS2A6NEH8 195 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 KRTAP9-7A8MTY7 169 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 H7C1D1 291 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 BIN1O00499 593 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 BUB1BO60566 1050 aaPredicted RBP4.78□□□□□ -1.64
LSM6-205ENST00000507449 MPOP05164 745 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 GLI1P08151 1106 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 FBLN1P23142 703 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 MAPKAPK2P49137 400 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 KIF11P52732 1056 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 ERVK-21P61565 698 aa4.78□□□□□ -1.64
LSM6-205ENST00000507449 YBX1P67809 324 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms