RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 MSH4O15457 936 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 POLR2MP0CAP2 368 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 RPS12P25398 132 aaKnown RBP12.83□□□□□ -0.35
USP46-204ENST00000503060 ZNF76P36508 570 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 DNM2P50570 870 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 COASYQ13057 564 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 TBC1D5Q92609 795 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 FAM210AQ96ND0 272 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 DESI2Q9BSY9 194 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 ABHD10Q9NUJ1 306 aa12.83□□□□□ -0.35
USP46-204ENST00000503060 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.83□□□□□ -0.35
USP46-204ENST00000503060 MRPL11Q9Y3B7 192 aaKnown RBP12.83□□□□□ -0.35
USP46-204ENST00000503060 PHF20L1A8MW92 1017 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 B4DLN1 442 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 PES1O00541 588 aaKnown RBP12.83□□□□□ -0.36
USP46-204ENST00000503060 CFBP00751 764 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 MTIF2P46199 727 aaKnown RBP12.83□□□□□ -0.36
USP46-204ENST00000503060 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 GPBP1Q86WP2 473 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 ZNF710Q8N1W2 664 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 EEF2KMTQ96G04 330 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 TEPSINQ96N21 525 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 MAP7D2Q96T17 732 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 FBXO28Q9NVF7 368 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 DNAI1Q9UI46 699 aa12.83□□□□□ -0.36
USP46-204ENST00000503060 SCAF8Q9UPN6 1271 aaKnown RBP12.83□□□□□ -0.36
USP46-204ENST00000503060 SMCHD1A6NHR9 2005 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 EGFRP00533 1210 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 CCDC175P0C221 793 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 TNFAIP1Q13829 316 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 SYCP1Q15431 976 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 TMTC1Q8IUR5 882 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 CYP2W1Q8TAV3 490 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 FBXO41Q8TF61 875 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 L2HGDHQ9H9P8 463 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 PUF60Q9UHX1 559 aaKnown RBP12.82□□□□□ -0.36
USP46-204ENST00000503060 VAV3Q9UKW4 847 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 ADGRG1Q9Y653 693 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 IGLV3-22A0A075B6J6 115 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 CYP11B2P19099 503 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 RPA1P27694 616 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 KRT9P35527 623 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 LRRC63Q05C16 580 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 LRRC41Q15345 812 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 FAM26FQ5R3K3 315 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 FOXR2Q6PJQ5 311 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 CATSPER3Q86XQ3 398 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 CCDC65Q8IXS2 484 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 GLIS3Q8NEA6 775 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 FEZ1Q99689 392 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 ZNF341Q9BYN7 854 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 ABCB11O95342 1321 aa12.82□□□□□ -0.36
USP46-204ENST00000503060 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
USP46-204ENST00000503060 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 PTGER2P43116 358 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 SLC12A3P55017 1021 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 LDHDQ86WU2 507 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 MYOCDQ8IZQ8 938 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 TSG101Q99816 390 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 NOC4LQ9BVI4 516 aaKnown RBP12.81□□□□□ -0.36
USP46-204ENST00000503060 MRPL44Q9H9J2 332 aaKnown RBP12.81□□□□□ -0.36
USP46-204ENST00000503060 BCS1LQ9Y276 419 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 NPHP3-ACAD11A0A0J9YXS1 232 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 TTC26A0AVF1 554 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 SMAPO00193 183 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 INPP5BP32019 993 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 GMPSP49915 693 aaPredicted RBP12.81□□□□□ -0.36
USP46-204ENST00000503060 ERVK-24P63145 666 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 TBC1D8BQ0IIM8 1120 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 MIIPQ5JXC2 388 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 C1QTNF12Q5T7M4 302 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 ICE2Q659A1 982 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 CYP26C1Q6V0L0 522 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 PIK3R5Q8WYR1 880 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 MYCBPQ99417 103 aaPredicted RBP12.81□□□□□ -0.36
USP46-204ENST00000503060 EHMT1Q9H9B1 1298 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 ZNF215Q9UL58 517 aaPredicted RBP12.81□□□□□ -0.36
USP46-204ENST00000503060 CAPN11Q9UMQ6 739 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 CEP83Q9Y592 693 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 LTBP3Q9NS15 1303 aa12.81□□□□□ -0.36
USP46-204ENST00000503060 ATAD5Q96QE3 1844 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 SLU7O95391 586 aaKnown RBP12.8□□□□□ -0.36
USP46-204ENST00000503060 NCBP1Q09161 790 aaKnown RBP12.8□□□□□ -0.36
USP46-204ENST00000503060 KIF4BQ2VIQ3 1234 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 ARSHQ5FYA8 562 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 LRRC55Q6ZSA7 311 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 EP400NLQ6ZTU2 488 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 WDR18Q9BV38 432 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 FAM117AQ9C073 453 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 DNM3Q9UQ16 869 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 LUC7L2Q9Y383 392 aaKnown RBP12.8□□□□□ -0.36
USP46-204ENST00000503060 PCDHA2Q9Y5H9 948 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 PITPNM2Q9BZ72 1349 aa12.8□□□□□ -0.36
USP46-204ENST00000503060 FRMD3A2A2Y4 597 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms