RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 NUDT12Q9BQG2 462 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 NUCKS1Q9H1E3 243 aaKnown RBP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 JMJD4Q9H9V9 463 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 JADE2Q9NQC1 790 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 KIAA1024Q9UPX6 916 aa8.81□□□□□ -1
HLA-DMB-262ENST00000498020 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.81□□□□□ -1
HLA-DMB-262ENST00000498020 PHACTR2O75167 634 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 E2F4Q16254 413 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 TTBK2Q6IQ55 1244 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 HS2ST1Q7LGA3 356 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 USP37Q86T82 979 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 GIMAP8Q8ND71 665 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 EHD4Q9H223 541 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 MRPL11Q9Y3B7 192 aaKnown RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 MYH3P11055 1940 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 F5H6K3 240 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 PSMC4P43686 418 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 USP11P51784 963 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 FKBP3Q00688 224 aaKnown RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 KLRC3Q07444 240 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 MAN2A1Q16706 1144 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 CDKAL1Q5VV42 579 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 TYW1BQ6NUM6 668 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 ZDHHC15Q96MV8 337 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 KBTBD4Q9NVX7 518 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 POTEMA6NI47 508 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 TMCO5BA8MYB1 307 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC172P0C7W6 258 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 CTCFP49711 727 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 DNA2P51530 1060 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 ZBED6P86452 979 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 TOGARAM2Q6ZUX3 1019 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 CLEC10AQ8IUN9 316 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 GUF1Q8N442 669 aaKnown RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 RAD54LQ92698 747 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 APOL6Q9BWW8 343 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 ABHD10Q9NUJ1 306 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 ADGRG1Q9Y653 693 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 NWD2Q9ULI1 1742 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 SHTN1A0MZ66 631 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 GCOM1H8Y6P7 765 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 CALUO43852 315 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 ENTPD3O75355 529 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 POLR2MP0CAP2 368 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 FCER1AP12319 257 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 FXR2P51116 673 aaKnown RBP eCLIP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 GTF2A2P52657 109 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 NBPF12Q5TAG4 269 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 AMIGO3Q86WK7 504 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 NELFCDQ8IXH7 590 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 EEF2KMTQ96G04 330 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 ZNF70Q9UC06 446 aaPredicted RBP8.8□□□□□ -1
HLA-DMB-262ENST00000498020 CDC23Q9UJX2 597 aa8.8□□□□□ -1
HLA-DMB-262ENST00000498020 MYZAPP0CAP1 466 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 SOX10P56693 466 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 MTMR2Q13614 643 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 NPY5RQ15761 445 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 WHAMMP3Q1A5X7 153 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 DDX12PQ92771 950 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 FAM207AQ9NSI2 230 aaPredicted RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 TBC1D7Q9P0N9 293 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 SERPINA10Q9UK55 444 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 LRP5O75197 1615 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L15C9J2P7 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L13C9JLJ4 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L11C9JVI0 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L18D6R9N7 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L22D6RA61 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L17D6RBQ6 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L19D6RCP7 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L20D6RJB6 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 ACTN2P35609 894 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 NOP2P46087 812 aaKnown RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 SNAP25P60880 206 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L24Q0WX57 530 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 HLTFQ14527 1009 aaKnown RBP eCLIP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 SMC1AQ14683 1233 aaKnown RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 SNRNP48Q6IEG0 339 aaKnown RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP17L6PQ6QN14 398 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 USP50Q70EL3 339 aaPredicted RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 ZFP91Q96JP5 570 aaPredicted RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 FERMT1Q9BQL6 677 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 PLVAPQ9BX97 442 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 NACA2Q9H009 215 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 ANKRD36CQ5JPF3 1778 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 BAZ2BQ9UIF8 2168 aaKnown RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 PLA2G4BP0C869 781 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 EPB41P11171 864 aaKnown RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 RAG1P15918 1043 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 VWA3BQ502W6 1294 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 ZNF354CQ86Y25 554 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 AGBL3Q8NEM8 1001 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 HERC5Q9UII4 1024 aaKnown RBP8.79□□□□□ -1
HLA-DMB-262ENST00000498020 PLCH1Q4KWH8 1693 aa8.79□□□□□ -1
HLA-DMB-262ENST00000498020 CCDC169A6NNP5 214 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 WNT7AO00755 349 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 SLC26A4O43511 780 aa8.78□□□□□ -1
HLA-DMB-262ENST00000498020 NDUFA10O95299 355 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms