RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CDK17Q00537 523 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 KLHL30Q0D2K2 578 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 INF2Q27J81 1249 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 PRDM11Q9NQV5 511 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 TRMT112Q9UI30 125 aaKnown RBP14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 JAG2Q9Y219 1238 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 UTP11Q9Y3A2 253 aaKnown RBP14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 A0A087X0T9 212 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 GOLGA6L10A0A0M3HER8 536 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 A0A1W2PQJ5 194 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 SPDYE3A6NKU9 549 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 RHOBTB3O94955 611 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 LUC7L3O95232 432 aaKnown RBP14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 FAM228BP0C875 321 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 ARID4AP29374 1257 aaPredicted RBP14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 DIP2AQ14689 1571 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 HOOK3Q86VS8 718 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 RNF10Q8N5U6 811 aaKnown RBP14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 ESR2Q92731 530 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 DCAF5Q96JK2 942 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 FMO2Q99518 471 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 GREM2Q9H772 168 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 SPATA31A3Q5VYP0 1347 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 PIK3C2AO00443 1686 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 MAP3K13O43283 966 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 LONP1P36776 959 aaKnown RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 MSH2P43246 934 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 TUBP50607 506 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 USP4Q13107 963 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 MEI1Q5TIA1 1274 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 CCDC25Q86WR0 208 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 GDAP1Q8TB36 358 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 TRIM4Q9C037 500 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 LRP2BPQ9P2M1 347 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 SIK3Q9Y2K2 1263 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 MED1Q15648 1581 aaPredicted RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 STXBP3O00186 592 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 PGRMC1O00264 195 aaKnown RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 RAD23BP54727 409 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 SLMAPQ14BN4 828 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 NUGGCQ68CJ6 796 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 FAM47EQ6ZV65 393 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 CCDC84Q86UT8 332 aaPredicted RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 LMNTD2Q8IXW0 634 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 ENAHQ8N8S7 591 aaPredicted RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 FBF1Q8TES7 1133 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 KCNK9Q9NPC2 374 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 PCDHGC5Q9Y5F6 944 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 MYO5AQ9Y4I1 1855 aaKnown RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 NMT2O60551 498 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 RARAP10276 462 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 EPS15P42566 896 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 DENND2CQ68D51 928 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 B4GALNT2Q8NHY0 566 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 SEMA6BQ9H3T3 888 aa14.25□□□□□ -0.13
GAPVD1-220ENST00000497580 MYH6P13533 1939 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 PRPF3O43395 683 aaKnown RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 GSTA1P08263 222 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 EVA1CP58658 441 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 DDX23Q9BUQ8 820 aaKnown RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 RNF41Q9H4P4 317 aaPredicted RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 DBR1Q9UK59 544 aaKnown RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 TCP11X1B4DZS4 312 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ATF3P18847 181 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 NAB2Q15742 525 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 MAN2A1Q16706 1144 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 CABP7Q86V35 215 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 C1orf131Q8NDD1 294 aaKnown RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ZNF317Q96PQ6 595 aaPredicted RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ADAM22Q9P0K1 906 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ZMYND8Q9ULU4 1186 aaPredicted RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ZNF142P52746 1687 aaPredicted RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ANKRD33BA6NCL7 494 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 PAEPP09466 180 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 RIPK1Q13546 671 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 IFI16Q16666 785 aaKnown RBP14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 KIF6Q6ZMV9 814 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 PEX26Q7Z412 305 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 IFT74Q96LB3 600 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 ETNK1Q9HBU6 452 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 DLGAP2Q9P1A6 1054 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 SNX24Q9Y343 169 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 C2CD2Q9Y426 696 aa14.24□□□□□ -0.13
GAPVD1-220ENST00000497580 RTL9Q8NET4 1388 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 PJA2O43164 708 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 AHCYL1O43865 530 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 FAM83BQ5T0W9 1011 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 CWF19L1Q69YN2 538 aaKnown RBP14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 TMEM154Q6P9G4 183 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 METTL13Q8N6R0 699 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 LRRC15Q8TF66 581 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 BAP1Q92560 729 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 TCP11L1Q9NUJ3 509 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 TBC1D7Q9P0N9 293 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 KRT13P13646 458 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 IGHMBP2P38935 993 aaKnown RBP14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 PRPHP41219 470 aa14.23□□□□□ -0.13
GAPVD1-220ENST00000497580 SRBD1Q8N5C6 995 aaKnown RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms