RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 TSSK4Q6SA08 328 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 SEPT14Q6ZU15 432 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 KCTD1Q719H9 257 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 ZDHHC14Q8IZN3 488 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 CCPG1Q9ULG6 757 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 DUSP12Q9UNI6 340 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 CELSR3Q9NYQ7 3312 aa10.62□□□□□ -0.71
GARNL3-219ENST00000495172 F2P00734 622 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 BMP3P12645 472 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 CASTP20810 708 aaKnown RBP10.61□□□□□ -0.71
GARNL3-219ENST00000495172 RASA1P20936 1047 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 G3BP1Q13283 466 aaKnown RBP eCLIP10.61□□□□□ -0.71
GARNL3-219ENST00000495172 SLFN13Q68D06 897 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 TMEM184AQ6ZMB5 413 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 CERS3Q8IU89 383 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 MIER1Q8N108 512 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 NYAP2Q9P242 653 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 DENND4AQ7Z401 1863 aa10.61□□□□□ -0.71
GARNL3-219ENST00000495172 TCRBV5S4A2TA0A5A2 114 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 MBD4O95243 580 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 CSTF1Q05048 431 aaKnown RBP10.6□□□□□ -0.71
GARNL3-219ENST00000495172 DDX10Q13206 875 aaKnown RBP10.6□□□□□ -0.71
GARNL3-219ENST00000495172 TKFCQ3LXA3 575 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 SLC9C2Q5TAH2 1124 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 WDR63Q8IWG1 891 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 GPR161Q8N6U8 529 aaKnown RBP10.6□□□□□ -0.71
GARNL3-219ENST00000495172 ATP6V0A1Q93050 837 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 CEP95Q96GE4 821 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 ADAM7Q9H2U9 754 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 KCNK12Q9HB15 430 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 ADD3Q9UEY8 706 aaKnown RBP10.6□□□□□ -0.71
GARNL3-219ENST00000495172 DBR1Q9UK59 544 aaKnown RBP10.6□□□□□ -0.71
GARNL3-219ENST00000495172 MTMR7Q9Y216 660 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 PATJQ8NI35 1801 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 RALGAPA1Q6GYQ0 2036 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
GARNL3-219ENST00000495172 FSCN2O14926 492 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 PRDM1O75626 825 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 EOMESO95936 686 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 GH1P01241 217 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 CHRNA1P02708 482 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 MCCP23508 829 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 EDNRBP24530 442 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 STAT2P52630 851 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 DGKDQ16760 1214 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 CES5AQ6NT32 575 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 CTR9Q6PD62 1173 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 RTN4RL1Q86UN2 441 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-219ENST00000495172 KDF1Q8NAX2 398 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-219ENST00000495172 NETO1Q8TDF5 533 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 BBC3Q96PG8 261 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-219ENST00000495172 TMEM121BQ9BXQ6 578 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-219ENST00000495172 CYP26B1Q9NR63 512 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 TMEM260Q9NX78 707 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 PRR12Q9ULL5 1215 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 SIT1Q9Y3P8 196 aa10.59□□□□□ -0.71
GARNL3-219ENST00000495172 USP9XQ93008 2570 aaPredicted RBP10.59□□□□□ -0.71
GARNL3-219ENST00000495172 MIA3Q5JRA6 1907 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 KIAA1217Q5T5P2 1943 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 C2orf16Q68DN1 1984 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 IGKV6D-41A0A0C4DH26 115 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 FGF18O76093 207 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 LPIN1Q14693 890 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 C19orf48Q6RUI8 117 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 PRR23BQ6ZRT6 265 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 CMTR2Q8IYT2 770 aaKnown RBP10.58□□□□□ -0.72
GARNL3-219ENST00000495172 PLCD3Q8N3E9 789 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 CLEC4DQ8WXI8 215 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 ZNF512BQ96KM6 892 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-219ENST00000495172 FARP1Q9Y4F1 1045 aaPredicted RBP10.58□□□□□ -0.72
GARNL3-219ENST00000495172 HCFC2Q9Y5Z7 792 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 ADAMTS20P59510 1910 aa10.58□□□□□ -0.72
GARNL3-219ENST00000495172 KALRNO60229 2985 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 C17orf102A2RUQ5 167 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 N4BP1O75113 896 aaKnown RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 SLC16A2P36021 539 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 PBX3P40426 434 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 RBM25P49756 843 aaKnown RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 VASPP50552 380 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 RPS6P62753 249 aaKnown RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 NAALADL2Q58DX5 795 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 SPOUT1Q5T280 376 aaKnown RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 GPR152Q8TDT2 470 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 STAG1Q8WVM7 1258 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 ATRIPQ8WXE1 791 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 APBB2Q92870 758 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 SECISBP2LQ93073 1101 aaKnown RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 CDCA3Q99618 268 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 TCF25Q9BQ70 676 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 EPC1Q9H2F5 836 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 ENTPD7Q9NQZ7 604 aa10.57□□□□□ -0.72
GARNL3-219ENST00000495172 SPATA6Q9NWH7 488 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 MTF2Q9Y483 593 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-219ENST00000495172 TICRRQ7Z2Z1 1910 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 SDK1Q7Z5N4 2213 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 FNDC1Q4ZHG4 1894 aaPredicted RBP10.56□□□□□ -0.72
GARNL3-219ENST00000495172 SPTLC1O15269 473 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 SRGAP2BP0DMP2 458 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 SMIM10L2AP0DMW4 78 aa10.56□□□□□ -0.72
GARNL3-219ENST00000495172 SMIM10L2BP0DMW5 78 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms