RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 MFSD14AQ96MC6 490 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 FOXQ1Q9C009 403 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 PRKAG3Q9UGI9 489 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 HDAC9Q9UKV0 1011 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 PRR19A6NJB7 356 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 APAF1O14727 1248 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 PCCAP05165 728 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 ZNF853P0CG23 659 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 HSP90B1P14625 803 aaKnown RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 BMS1Q14692 1282 aaKnown RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 NKG7Q16617 165 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 ZNF746Q6NUN9 644 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 ANKS3Q6ZW76 656 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 ARMCX6Q7L4S7 300 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 NLRC3Q7RTR2 1065 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 UBE3DQ7Z6J8 389 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 RASAL3Q86YV0 1011 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 FBXL6Q8N531 539 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 C19orf47Q8N9M1 422 aaKnown RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 MFSD2AQ8NA29 543 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 CCDC191Q8NCU4 936 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 HNRNPLLQ8WVV9 542 aaKnown RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 METTL22Q9BUU2 404 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 R3HDMLQ9H3Y0 253 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 ANTXR1Q9H6X2 564 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 CNNM2Q9H8M5 875 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 CWC25Q9NXE8 425 aaPredicted RBP6.58□□□□□ -1.36
PTCD3-219ENST00000494323 MINPP1Q9UNW1 487 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 FZD1Q9UP38 647 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 MAP3K2Q9Y2U5 619 aa6.58□□□□□ -1.36
PTCD3-219ENST00000494323 XDHP47989 1333 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
PTCD3-219ENST00000494323 CHURC1-FNTBB4DL54 471 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 WNT10BO00744 389 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 DNAJA2O60884 412 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 MED26O95402 600 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 NME1P15531 152 aaKnown RBP6.57□□□□□ -1.36
PTCD3-219ENST00000494323 RAG1P15918 1043 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 GNAI1P63096 354 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 FKBP1BP68106 108 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 RAB33AQ14088 237 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 ARSHQ5FYA8 562 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 PRAMEF13Q5VWM6 474 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 INTS3Q68E01 1043 aaKnown RBP6.57□□□□□ -1.36
PTCD3-219ENST00000494323 SEZ6L2Q6UXD5 910 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 JAZF1Q86VZ6 243 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 TSPYL6Q8N831 410 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 TTLL11Q8NHH1 800 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 ATG4CQ96DT6 458 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 GREM2Q9H772 168 aa6.57□□□□□ -1.36
PTCD3-219ENST00000494323 LRRC37AA6NMS7 1700 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 PI4KAP2A4QPH2 592 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 UPK3BL1B0FP48 263 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 UPK3BL2E5RIL1 263 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 TNFRSF10CO14798 259 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 SASH1O94885 1247 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 DDX58O95786 925 aaKnown RBP6.56□□□□□ -1.36
PTCD3-219ENST00000494323 IGKV5-2P06315 115 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 GUCY2CP25092 1073 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 CCNFP41002 786 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 TM4SF4P48230 202 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 CCT4P50991 539 aaKnown RBP6.56□□□□□ -1.36
PTCD3-219ENST00000494323 DACT2Q5SW24 774 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 CCDC30Q5VVM6 783 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 TTLL5Q6EMB2 1281 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 KSR2Q6VAB6 950 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 PI4KAP1Q8N8J0 262 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 CYB5D2Q8WUJ1 264 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 CDC5LQ99459 802 aaKnown RBP6.56□□□□□ -1.36
PTCD3-219ENST00000494323 OSBPL1AQ9BXW6 950 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 KRTAP9-9Q9BYP9 154 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 KRTAP9-4Q9BYQ2 154 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 BSDC1Q9NW68 430 aaPredicted RBP6.56□□□□□ -1.36
PTCD3-219ENST00000494323 IFT57Q9NWB7 429 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 R3HCC1Q9Y3T6 440 aaKnown RBP6.56□□□□□ -1.36
PTCD3-219ENST00000494323 SLC12A7Q9Y666 1083 aa6.56□□□□□ -1.36
PTCD3-219ENST00000494323 SNAP23O00161 211 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 SMAD7O15105 426 aaKnown RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 DYNC1LI2O43237 492 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 F13BP05160 661 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 SPINK2P20155 84 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 KLRK1P26718 216 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 NF2P35240 595 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 CASP7P55210 303 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 CTSWP56202 376 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 RASA3Q14644 834 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 PKN2Q16513 984 aaKnown RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 CPSF6Q16630 551 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 STRIP1Q5VSL9 837 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 G2E3Q7L622 706 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 UBE3BQ7Z3V4 1068 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 PHACTR4Q8IZ21 702 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 MKL1Q969V6 931 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 CCDC74BQ96LY2 380 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 TBC1D32Q96NH3 1257 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 DPH2Q9BQC3 489 aaPredicted RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 C1GALT1Q9NS00 363 aa6.55□□□□□ -1.36
PTCD3-219ENST00000494323 ANGEL1Q9UNK9 670 aaKnown RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 TMA7Q9Y2S6 64 aaKnown RBP6.55□□□□□ -1.36
PTCD3-219ENST00000494323 LEMD3Q9Y2U8 911 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms