RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 MYH2Q9UKX2 1941 aa7.79□□□□□ -1.16
TRA2B-216ENST00000493864 GAKO14976 1311 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 ZNF646O15015 1829 aaPredicted RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 SCN4AP35499 1836 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 DCDC2CA8MYV0 355 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 TMPRSS2O15393 492 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 BAG3O95817 575 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 F13A1P00488 732 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 FGAP02671 866 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 RBM5P52756 815 aaKnown RBP eCLIP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 RHBDL3P58872 404 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 C1QTNF8P60827 252 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 ALX1Q15699 326 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 CFAP100Q494V2 611 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 APOBEC3HQ6NTF7 200 aaKnown RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 FBXL19Q6PCT2 694 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 IFNL3Q8IZI9 196 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 SDR42E1Q8WUS8 393 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 ZNF296Q8WUU4 475 aaPredicted RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 ELMO3Q96BJ8 720 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 PRMT6Q96LA8 375 aaPredicted RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 TBC1D32Q96NH3 1257 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 NOL10Q9BSC4 688 aaKnown RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 DSCC1Q9BVC3 393 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 CRNKL1Q9BZJ0 848 aaKnown RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 UPF2Q9HAU5 1272 aaKnown RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 USP40Q9NVE5 1235 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 CNOT7Q9UIV1 285 aaKnown RBP7.78□□□□□ -1.16
TRA2B-216ENST00000493864 PCDHGC5Q9Y5F6 944 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 PSME4Q14997 1843 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 MYO3BQ8WXR4 1341 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 SYNGAP1Q96PV0 1343 aa7.78□□□□□ -1.16
TRA2B-216ENST00000493864 SLC27A2O14975 620 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 DDNO94850 711 aaPredicted RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 GNAT2P19087 354 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 GARTP22102 1010 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 RPS12P25398 132 aaKnown RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 CDK8P49336 464 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 ZNF280AP59817 542 aaPredicted RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 INPP5AQ14642 412 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 NECTIN1Q15223 517 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 ZC3H12AQ5D1E8 599 aaKnown RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 CREB3L3Q68CJ9 461 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 CDC42EP5Q6NZY7 148 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 CCDC84Q86UT8 332 aaPredicted RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 C12orf40Q86WS4 652 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 TEX11Q8IYF3 940 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 ZNF654Q8IZM8 581 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 C2CD4AQ8NCU7 369 aaPredicted RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 DPF2Q92785 391 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 UTP4Q969X6 686 aaKnown RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 PLPPR2Q96GM1 343 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 FAM46AQ96IP4 442 aaKnown RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 ZDHHC15Q96MV8 337 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 SPON2Q9BUD6 331 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 EPB41L4AQ9HCS5 686 aaPredicted RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 CRIM1Q9NZV1 1036 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 HDAC9Q9UKV0 1011 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 PALD1Q9ULE6 856 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.77□□□□□ -1.17
TRA2B-216ENST00000493864 ACTL7BQ9Y614 415 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 TAF6LQ9Y6J9 622 aa7.77□□□□□ -1.17
TRA2B-216ENST00000493864 CYP2D7A0A087X1C5 515 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 SMIM22K7EJ46 135 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 EPB41L2O43491 1005 aaKnown RBP7.76□□□□□ -1.17
TRA2B-216ENST00000493864 BPNT1O95861 308 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 HSPA4P34932 840 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 ASPAP45381 313 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 USP11P51784 963 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 RAD51AP2Q09MP3 1159 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 DLGAP5Q15398 846 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 TBC1D10BQ4KMP7 808 aaPredicted RBP7.76□□□□□ -1.17
TRA2B-216ENST00000493864 WIPI1Q5MNZ9 446 aaPredicted RBP7.76□□□□□ -1.17
TRA2B-216ENST00000493864 GPAT2Q6NUI2 795 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 LRFN4Q6PJG9 635 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 MAPKAPK5Q8IW41 473 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 GPC2Q8N158 579 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 TGFBRAP1Q8WUH2 860 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 GATAD2BQ8WXI9 593 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 TP53INP1Q96A56 240 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 ZBED3Q96IU2 234 aaPredicted RBP7.76□□□□□ -1.17
TRA2B-216ENST00000493864 FANCD2OSQ96PS1 177 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 KIF2CQ99661 725 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 SSBP4Q9BWG4 385 aaPredicted RBP7.76□□□□□ -1.17
TRA2B-216ENST00000493864 TDRD3Q9H7E2 651 aaKnown RBP7.76□□□□□ -1.17
TRA2B-216ENST00000493864 CCSER2Q9H7U1 834 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 MYOZ2Q9NPC6 264 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 PICK1Q9NRD5 415 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 CTNNA3Q9UI47 895 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 SNX14Q9Y5W7 946 aa7.76□□□□□ -1.17
TRA2B-216ENST00000493864 RPAP1Q9BWH6 1393 aaPredicted RBP7.75□□□□□ -1.17
TRA2B-216ENST00000493864 MAST2Q6P0Q8 1798 aa7.75□□□□□ -1.17
TRA2B-216ENST00000493864 ADAMTSL1Q8N6G6 1762 aa7.75□□□□□ -1.17
TRA2B-216ENST00000493864 FAM221AA4D161 298 aa7.75□□□□□ -1.17
TRA2B-216ENST00000493864 GLTPD2A6NH11 291 aa7.75□□□□□ -1.17
TRA2B-216ENST00000493864 H7C1D1 291 aa7.75□□□□□ -1.17
TRA2B-216ENST00000493864 TLR3O15455 904 aaKnown RBP7.75□□□□□ -1.17
TRA2B-216ENST00000493864 WDHD1O75717 1129 aaPredicted RBP7.75□□□□□ -1.17
TRA2B-216ENST00000493864 CYP21A2P08686 494 aa7.75□□□□□ -1.17
TRA2B-216ENST00000493864 CYP2D6P10635 497 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms