RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 KRT18P05783 430 aaKnown RBP15.54■□□□□ 0.08
SMPD4-219ENST00000491128 CYP11B2P19099 503 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 CDK11BP21127 795 aaKnown RBP15.54■□□□□ 0.08
SMPD4-219ENST00000491128 CCND2P30279 289 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 SLC12A3P55017 1021 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 SP2Q02086 613 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 HYIQ5T013 277 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 MIER3Q7Z3K6 550 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 LXNQ9BS40 222 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 RUSC1Q9BVN2 902 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 KDM3AQ9Y4C1 1321 aa15.54■□□□□ 0.08
SMPD4-219ENST00000491128 POTEB2H3BUK9 544 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 UGCGQ16739 394 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 CCDC144BQ3MJ40 725 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 SPRYD7Q5W111 196 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 FILIP1Q7Z7B0 1213 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 MB21D1Q8N884 522 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 GIMAP8Q8ND71 665 aaPredicted RBP15.53■□□□□ 0.08
SMPD4-219ENST00000491128 CHST13Q8NET6 341 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 RMND1Q9NWS8 449 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 MAP3K20Q9NYL2 800 aaKnown RBP15.53■□□□□ 0.08
SMPD4-219ENST00000491128 DACH1Q9UI36 760 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 FRMPD4Q14CM0 1322 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 ERVK-9P63128 1117 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 ERVK-24P63145 666 aa15.53■□□□□ 0.08
SMPD4-219ENST00000491128 ENOX1Q8TC92 643 aaKnown RBP15.53■□□□□ 0.08
SMPD4-219ENST00000491128 DCAF8L1A6NGE4 600 aa15.52■□□□□ 0.08
SMPD4-219ENST00000491128 ZNF157P51786 506 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-219ENST00000491128 PAK1Q13153 545 aa15.52■□□□□ 0.08
SMPD4-219ENST00000491128 TPD52L1Q16890 204 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-219ENST00000491128 UTP14CQ5TAP6 766 aaKnown RBP15.52■□□□□ 0.08
SMPD4-219ENST00000491128 CHADLQ6NUI6 762 aa15.52■□□□□ 0.08
SMPD4-219ENST00000491128 ADSSL1Q8N142 457 aa15.52■□□□□ 0.08
SMPD4-219ENST00000491128 PANK4Q9NVE7 773 aa15.52■□□□□ 0.08
SMPD4-219ENST00000491128 RABGAP1Q9Y3P9 1069 aa15.52■□□□□ 0.08
SMPD4-219ENST00000491128 NKRFO15226 690 aaKnown RBP eCLIP15.52■□□□□ 0.07
SMPD4-219ENST00000491128 CETPP11597 493 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 TMEM63BQ5T3F8 832 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 B3GNT9Q6UX72 402 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 RIT2Q99578 217 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 REEP2Q9BRK0 252 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 MAGEF1Q9HAY2 307 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 PNMA2Q9UL42 364 aa15.52■□□□□ 0.07
SMPD4-219ENST00000491128 BCRP11274 1271 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 ERCC5P28715 1186 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-219ENST00000491128 ALDH5A1P51649 535 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-219ENST00000491128 GTF2A2P52657 109 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 UBASH3AP57075 661 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 TPM4P67936 248 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 COASYQ13057 564 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 KCNB1Q14721 858 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 HERC4Q5GLZ8 1057 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-219ENST00000491128 UNC13DQ70J99 1090 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 CCDC186Q7Z3E2 898 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 INPP4AQ96PE3 977 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-219ENST00000491128 POLR3CQ9BUI4 534 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-219ENST00000491128 SARM1Q6SZW1 724 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 CYFIP1Q7L576 1253 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 NELFCDQ8IXH7 590 aa15.51■□□□□ 0.07
SMPD4-219ENST00000491128 CASP5P51878 434 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 GOLGA8FQ08AF8 430 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 GOLGA8DPQ0D2H9 430 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 EPHA7Q15375 998 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 SPATA1Q5VX52 437 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 NLRX1Q86UT6 975 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 SYT2Q8N9I0 419 aaPredicted RBP15.5■□□□□ 0.07
SMPD4-219ENST00000491128 MMP19Q99542 508 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 IKZF4Q9H2S9 585 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 INTS13Q9NVM9 706 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 TCEAL9Q9UHQ7 104 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 MYL1P05976 194 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 KCNA2P16389 499 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 ZNF18P17022 549 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 LRMPQ12912 555 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 GIT2Q14161 759 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 STXBP2Q15833 593 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 ANKRD40Q6AI12 368 aa15.5■□□□□ 0.07
SMPD4-219ENST00000491128 KCTD2Q14681 263 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 PLA2G4FQ68DD2 849 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 RINT1Q6NUQ1 792 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 C17orf53Q8N3J3 647 aaPredicted RBP15.49■□□□□ 0.07
SMPD4-219ENST00000491128 SEMA6BQ9H3T3 888 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.49■□□□□ 0.07
SMPD4-219ENST00000491128 FBXO40Q9UH90 709 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.49■□□□□ 0.07
SMPD4-219ENST00000491128 NPEPPSP55786 919 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 LY6KQ17RY6 165 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 TMC6Q7Z403 805 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 KSR1Q8IVT5 923 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 FAM133AQ8N9E0 248 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 CCDC47Q96A33 483 aaKnown RBP15.49■□□□□ 0.07
SMPD4-219ENST00000491128 TRIM47Q96LD4 638 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 FGD4Q96M96 766 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 ZIC5Q96T25 663 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 SRRTQ9BXP5 876 aaKnown RBP15.49■□□□□ 0.07
SMPD4-219ENST00000491128 CPA4Q9UI42 421 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 RWDD2AQ9UIY3 292 aa15.49■□□□□ 0.07
SMPD4-219ENST00000491128 TEX33O43247 280 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 EYA4O95677 639 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms