RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 TBX22Q9Y458 520 aa4.83□□□□□ -1.64
CD46-215ENST00000488596 PCDHB4Q9Y5E5 795 aa4.83□□□□□ -1.64
CD46-215ENST00000488596 H7BY64 318 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 AGRPO00253 132 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 AMHP03971 560 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 EPHB4P54760 987 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 PPP2R2AP63151 447 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 KCNAB2Q13303 367 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 LSAMPQ13449 338 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 TESK1Q15569 626 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 CHRNA2Q15822 529 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 EMC4Q5J8M3 183 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 ACBD5Q5T8D3 534 aaPredicted RBP4.82□□□□□ -1.64
CD46-215ENST00000488596 YOD1Q5VVQ6 348 aaPredicted RBP4.82□□□□□ -1.64
CD46-215ENST00000488596 FOXB2Q5VYV0 432 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 ARHGEF18Q6ZSZ5 1173 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.82□□□□□ -1.64
CD46-215ENST00000488596 CHAMP1Q96JM3 812 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 EPN3Q9H201 632 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 DEF6Q9H4E7 631 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 ZDHHC9Q9Y397 364 aa4.82□□□□□ -1.64
CD46-215ENST00000488596 ESYT3A0FGR9 886 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 IQCA1LA6NCM1 817 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 PATE3B3GLJ2 98 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 ADCY3O60266 1144 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 COL6A1P12109 1028 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 NFATC3Q12968 1075 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 SQSTM1Q13501 440 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 R3HDM1Q15032 1099 aaKnown RBP4.81□□□□□ -1.64
CD46-215ENST00000488596 PHF19Q5T6S3 580 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 TMC5Q6UXY8 1006 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 PPIL6Q8IXY8 311 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 LRRC47Q8N1G4 583 aaKnown RBP4.81□□□□□ -1.64
CD46-215ENST00000488596 KLHL36Q8N4N3 616 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 ZBTB38Q8NAP3 1195 aaPredicted RBP4.81□□□□□ -1.64
CD46-215ENST00000488596 TMEM145Q8NBT3 493 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 ZNF669Q96BR6 464 aaPredicted RBP4.81□□□□□ -1.64
CD46-215ENST00000488596 C1orf159Q96HA4 380 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 SGSM3Q96HU1 749 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 TMEM209Q96SK2 561 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 CDK5RAP1Q96SZ6 601 aaKnown RBP4.81□□□□□ -1.64
CD46-215ENST00000488596 VPS11Q9H270 941 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 CDIP1Q9H305 208 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 JADE2Q9NQC1 790 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 ARHGEF4Q9NR80 690 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 CLDND1Q9NY35 253 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 FTSJ1Q9UET6 329 aa4.81□□□□□ -1.64
CD46-215ENST00000488596 TMA7Q9Y2S6 64 aaKnown RBP4.81□□□□□ -1.64
CD46-215ENST00000488596 CADPSQ9ULU8 1353 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 PRODHO43272 600 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 FZD7O75084 574 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 CYP7B1O75881 506 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 CPP00450 1065 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 CAPNS1P04632 268 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 LTBRP36941 435 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 KCNJ6P48051 423 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 GFRA1P56159 465 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 HSP90AA2PQ14568 343 aaPredicted RBP4.8□□□□□ -1.64
CD46-215ENST00000488596 C2orf27AQ580R0 203 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 FAM209AQ5JX71 171 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 SLFN13Q68D06 897 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 SDE2Q6IQ49 451 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 TRMT10BQ6PF06 316 aaKnown RBP4.8□□□□□ -1.64
CD46-215ENST00000488596 PROSER1Q86XN7 944 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 NUDT10Q8NFP7 164 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 THAP3Q8WTV1 239 aaPredicted RBP4.8□□□□□ -1.64
CD46-215ENST00000488596 NUDT11Q96G61 164 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 CCDC140Q96MF4 163 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 MEGF9Q9H1U4 602 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 MYOTQ9UBF9 498 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 PTCH2Q9Y6C5 1203 aa4.8□□□□□ -1.64
CD46-215ENST00000488596 TRAV20A0A0B4J274 112 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 DGKIO75912 1065 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 NSMFQ6X4W1 530 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 USP51Q70EK9 711 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 JMYQ8N9B5 988 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 Q8TCH9 128 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 CDC6Q99741 560 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 AARSD1Q9BTE6 412 aaKnown RBP4.79□□□□□ -1.64
CD46-215ENST00000488596 IER2Q9BTL4 223 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 JAM3Q9BX67 310 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 SMOC1Q9H4F8 434 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 EPB41L1Q9H4G0 881 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 BARX1Q9HBU1 254 aaPredicted RBP4.79□□□□□ -1.64
CD46-215ENST00000488596 FANCLQ9NW38 375 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 NPFFR2Q9Y5X5 522 aa4.79□□□□□ -1.64
CD46-215ENST00000488596 BLACEA4D250 179 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 ZNF623O75123 536 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 KLHL18O94889 574 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 PABPC1P11940 636 aaKnown RBP4.78□□□□□ -1.64
CD46-215ENST00000488596 C21orf62-AS1Q17RA5 79 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 CRB2Q5IJ48 1285 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 SPDYAQ5MJ70 313 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 SLC35F1Q5T1Q4 408 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 RBM12BQ8IXT5 1001 aaKnown RBP4.78□□□□□ -1.64
CD46-215ENST00000488596 FAM177A1Q8N128 213 aaPredicted RBP4.78□□□□□ -1.64
CD46-215ENST00000488596 CLEC4DQ8WXI8 215 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 OSBP2Q969R2 916 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 EXOC2Q96KP1 924 aa4.78□□□□□ -1.64
CD46-215ENST00000488596 PCED1AQ9H1Q7 454 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms