RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 POTEDQ86YR6 584 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 TXNRD2Q9NNW7 524 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 SRPRBQ9Y5M8 271 aaKnown RBP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 PARP14Q460N5 1801 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 FOSP01100 380 aaPredicted RBP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 TUBBP07437 444 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 ZBTB48P10074 688 aaPredicted RBP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 ZNF18P17022 549 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 RPS6P62753 249 aaKnown RBP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 ARHGAP4P98171 946 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 PABPC4Q13310 644 aaKnown RBP eCLIP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 PNOCQ13519 176 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 IL17AQ16552 155 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 HSP90B2PQ58FF3 399 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 MCF2L2Q86YR7 1114 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 RASAL3Q86YV0 1011 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 PTPN18Q99952 460 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 IRX2Q9BZI1 471 aaPredicted RBP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 CSRNP2Q9H175 543 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 R3HDMLQ9H3Y0 253 aa15.22■□□□□ 0.03
COPS7B-221ENST00000488111 ABT1Q9ULW3 272 aaKnown RBP15.22■□□□□ 0.03
COPS7B-221ENST00000488111 ATP2A1O14983 1001 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 BMP15O95972 392 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 HSD17B4P51659 736 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 VSNL1P62760 191 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 Q3C1V9 767 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 RGMBQ6NW40 437 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 SLC30A10Q6XR72 485 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 MMS22LQ6ZRQ5 1243 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 GJA10Q969M2 543 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 RBPJLQ9UBG7 517 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 LOC285556D6RIA3 1793 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 CNMDO75829 334 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 TOMM70O94826 608 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 BRD2P25440 801 aaKnown RBP15.21■□□□□ 0.03
COPS7B-221ENST00000488111 GRM1Q13255 1194 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 BAATQ14032 418 aaPredicted RBP15.21■□□□□ 0.03
COPS7B-221ENST00000488111 RNF207Q6ZRF8 634 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 USP49Q70CQ1 688 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 TADA2BQ86TJ2 420 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.03
COPS7B-221ENST00000488111 PANX2Q96RD6 677 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 ACBD3Q9H3P7 528 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 ADGRG1Q9Y653 693 aa15.21■□□□□ 0.03
COPS7B-221ENST00000488111 COL11A1P12107 1806 aaPredicted RBP15.21■□□□□ 0.03
COPS7B-221ENST00000488111 A0A087WUV0 522 aaPredicted RBP15.2■□□□□ 0.02
COPS7B-221ENST00000488111 YY1P25490 414 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 SREBF1P36956 1147 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 MTF1Q14872 753 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 MCTP2Q6DN12 878 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 CRYGNQ8WXF5 182 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 CCDC102AQ96A19 550 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 TAAR1Q96RJ0 339 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 SPATC1LQ9H0A9 340 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 FAM204AQ9H8W3 233 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 DDX25Q9UHL0 483 aaKnown RBP15.2■□□□□ 0.02
COPS7B-221ENST00000488111 PNMA2Q9UL42 364 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 KIF5CO60282 957 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 BMP6P22004 513 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 AARSP49588 968 aaKnown RBP eCLIP15.2■□□□□ 0.02
COPS7B-221ENST00000488111 USP11P51784 963 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 NCAPG2Q86XI2 1143 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 MB21D1Q8N884 522 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 CYP2W1Q8TAV3 490 aa15.2■□□□□ 0.02
COPS7B-221ENST00000488111 SMCR8Q8TEV9 937 aaPredicted RBP15.2■□□□□ 0.02
COPS7B-221ENST00000488111 TRPM7Q96QT4 1865 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 CDC25AP30304 524 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 PSEN1P49768 467 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 RESP18Q5W5W9 173 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 PPP4R3AQ6IN85 833 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 ELOA2Q8IYF1 753 aaPredicted RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 EPSTI1Q96J88 318 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 CEP89Q96ST8 783 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 MOV10L1Q9BXT6 1211 aaKnown RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 ACAD9Q9H845 621 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 VIPAS39Q9H9C1 493 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 TLL2Q9Y6L7 1015 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 LRRIQ3A6PVS8 624 aaPredicted RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 FAM86B1E9PN63 330 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 FAM86B2P0C5J1 330 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 OR52Z1P0C646 297 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 ZNF76P36508 570 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 TXKP42681 527 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 CALCRLQ16602 461 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 PRR16Q569H4 304 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 DNAJC21Q5F1R6 531 aaKnown RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 DTHD1Q6ZMT9 781 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 ZNF784Q8NCA9 323 aaPredicted RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 FERMT2Q96AC1 680 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 NAA15Q9BXJ9 866 aaKnown RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 A1CFQ9NQ94 594 aaKnown RBP15.19■□□□□ 0.02
COPS7B-221ENST00000488111 PNMA3Q9UL41 463 aa15.19■□□□□ 0.02
COPS7B-221ENST00000488111 SOWAHDA6NJG2 315 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 TMEM88BA6NKF7 163 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 GSCP56915 257 aaPredicted RBP15.18■□□□□ 0.02
COPS7B-221ENST00000488111 WHAMMP3Q1A5X7 153 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 WDR93Q6P2C0 686 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 RAD9BQ6WBX8 426 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 ANKRD23Q86SG2 305 aa15.18■□□□□ 0.02
COPS7B-221ENST00000488111 RIOX2Q8IUF8 465 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms