RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 SLAIN1Q8ND83 568 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 RASSF8Q8NHQ8 419 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 NEK9Q8TD19 979 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 PYM1Q9BRP8 204 aaKnown RBP19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 CCDC39Q9UFE4 941 aa19.92■□□□□ 0.78
SMARCD3-212ENST00000485610 ARID2Q68CP9 1835 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 GH1P01241 217 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 SYKP43405 635 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 EPHA7Q15375 998 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 DUSP28Q4G0W2 176 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 PRAMEF19Q5SWL8 479 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 DHX37Q8IY37 1157 aaKnown RBP19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 CALML4Q96GE6 196 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 BCAS3Q9H6U6 928 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 MLXIPQ9HAP2 919 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 DISC1Q9NRI5 854 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 SAMM50Q9Y512 469 aa19.91■□□□□ 0.78
SMARCD3-212ENST00000485610 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 FOXN1O15353 648 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 SORBS3O60504 671 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 CCT6AP40227 531 aaKnown RBP19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 ACTR2P61160 394 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 SP4Q02446 784 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 TNFAIP2Q03169 654 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 SKOR2Q2VWA4 1001 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 FMR1NBQ8N0W7 255 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 ENGASEQ8NFI3 743 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 COPS5Q92905 334 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 CDK5RAP3Q96JB5 506 aa19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 EIF2AK1Q9BQI3 630 aaKnown RBP19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 POLR3CQ9BUI4 534 aaPredicted RBP19.9■□□□□ 0.78
SMARCD3-212ENST00000485610 NR1I2O75469 434 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 HSPA1AP0DMV8 641 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 HSPA1BP0DMV9 641 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 AKR1A1P14550 325 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 SMPD1P17405 629 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 RPA1P27694 616 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 ARHGAP1Q07960 439 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 KARSQ15046 597 aaKnown RBP19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 KLHL40Q2TBA0 621 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 HYIQ5T013 277 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 PDILTQ8N807 584 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 TRPV1Q8NER1 839 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 EMID1Q96A84 441 aaPredicted RBP19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 NT5C3AQ9H0P0 336 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 TUFT1Q9NNX1 390 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 FAM184BQ9ULE4 1060 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 PCDHA10Q9Y5I2 948 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 PTCH2Q9Y6C5 1203 aa19.89■□□□□ 0.77
SMARCD3-212ENST00000485610 A0A087X0B3 334 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 KINO60870 393 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 PSAPP07602 524 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 PRKAR2AP13861 404 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 PLCG1P19174 1290 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 CTCFP49711 727 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 CACNB2Q08289 660 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 TRIM32Q13049 653 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 SNW1Q13573 536 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 LAMC2Q13753 1193 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 ZRSR1Q15695 479 aaKnown RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 TMEM63BQ5T3F8 832 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 GJC2Q5T442 439 aaPredicted RBP19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 SPATA33Q96N06 139 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 DACT1Q9NYF0 836 aa19.88■□□□□ 0.77
SMARCD3-212ENST00000485610 POTEB3A0JP26 581 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 NOP56O00567 594 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 POLR2DO15514 142 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 ADCY6O43306 1168 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 MED24O75448 989 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 ZNF202O95125 648 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 SUPT20HL2P0C7V6 817 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 MUTP22033 750 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 GRK4P32298 578 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 STAT6P42226 847 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 CYP4A11Q02928 519 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 GRB10Q13322 594 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 TMEM119Q4V9L6 283 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 MAP3K21Q5TCX8 1036 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 RRAGBQ5VZM2 374 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 MIS18BP1Q6P0N0 1132 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 POTEBQ6S5H4 581 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 IQUBQ8NA54 791 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 DHX58Q96C10 678 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 DYDC2Q96IM9 177 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 PNMA5Q96PV4 448 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 HSD17B14Q9BPX1 270 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 DDX19AQ9NUU7 478 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 USP25Q9UHP3 1055 aa19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 GNEQ9Y223 722 aaKnown RBP19.87■□□□□ 0.77
SMARCD3-212ENST00000485610 TRAK2O60296 914 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 ATG7O95352 703 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 P4HBP07237 508 aaKnown RBP19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 SPATA31C1P0DKV0 1188 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 E2F4Q16254 413 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 ABHD15Q6UXT9 468 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 CATSPER3Q86XQ3 398 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 OR6J1Q8NGC5 347 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 PPTC7Q8NI37 304 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 GPR20Q99678 358 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 LXNQ9BS40 222 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms