RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 C1orf159Q96HA4 380 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 TMEM87BQ96K49 555 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 TTC1Q99614 292 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 CARD10Q9BWT7 1032 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 BHMT2Q9H2M3 363 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 VPS45Q9NRW7 570 aa4.03□□□□□ -1.76
SMC6-208ENST00000481708 ATXN7L1Q9ULK2 861 aaPredicted RBP4.03□□□□□ -1.76
SMC6-208ENST00000481708 SHOXO15266 292 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 LTFP02788 710 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 PABPC1P11940 636 aaKnown RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 NME1P15531 152 aaKnown RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 FGFR3P22607 806 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 OVCH2Q7RTZ1 564 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 ZNF227Q86WZ6 799 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 TMEM192Q8IY95 271 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 PNMA5Q96PV4 448 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 BHLHE41Q9C0J9 482 aaPredicted RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 EMC7Q9NPA0 242 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 CDC23Q9UJX2 597 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 J3QW42 95 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 ARNTLO00327 626 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 BRINP1O60477 761 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 SETSIPP0DME0 302 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 PPM1FP49593 454 aaPredicted RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 ATP11AP98196 1134 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 PRSS53Q2L4Q9 553 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 HFE2Q6ZVN8 426 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 KRT27Q7Z3Y8 459 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 MAATS1Q7Z4T9 603 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 TBC1D1Q86TI0 1168 aaPredicted RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 RASSF3Q86WH2 238 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 FAM43AQ8N2R8 423 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 TAB3Q8N5C8 712 aaPredicted RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 IFT22Q9H7X7 185 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 NDOR1Q9UHB4 597 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 CASP8AP2Q9UKL3 1982 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 GLRX3O76003 335 aaKnown RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 RPL6Q02878 288 aaKnown RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 ARHGAP29Q52LW3 1261 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 TDRD10Q5VZ19 366 aaKnown RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 ZBTB34Q8NCN2 500 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 NSUN6Q8TEA1 469 aaKnown RBP4.02□□□□□ -1.77
SMC6-208ENST00000481708 NXPE3Q969Y0 559 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 KIAA1191Q96A73 305 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.02□□□□□ -1.77
SMC6-208ENST00000481708 RIC8AQ9NPQ8 531 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 RRN3Q9NYV6 651 aa4.02□□□□□ -1.77
SMC6-208ENST00000481708 ERBB4Q15303 1308 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 A0A096LPE4 126 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 A0A1B0GVC2 190 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 A0A1W2PPZ6 126 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 F5H423 210 aaPredicted RBP4.01□□□□□ -1.77
SMC6-208ENST00000481708 DLX3O60479 287 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PAPLNO95428 1278 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 IGHDP01880 384 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PSAPP07602 524 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 POLD1P28340 1107 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 ADD2P35612 726 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 STT3AP46977 705 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PLAURQ03405 335 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 TMEM240Q5SV17 173 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 FAM182BQ5T319 152 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 FAM26EQ8N5C1 309 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 KIAA1958Q8N8K9 716 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 AIFM3Q96NN9 605 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 WDR12Q9GZL7 423 aaKnown RBP4.01□□□□□ -1.77
SMC6-208ENST00000481708 KMT5AQ9NQR1 393 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 C14orf119Q9NWQ9 140 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 CEP72Q9P209 647 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 NAGPAQ9UK23 515 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PNPLA7Q6ZV29 1317 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 DHX16O60231 1041 aaKnown RBP4.01□□□□□ -1.77
SMC6-208ENST00000481708 PPFIA3O75145 1194 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 VDRP11473 427 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 ZKSCAN1P17029 563 aaPredicted RBP4.01□□□□□ -1.77
SMC6-208ENST00000481708 CHKAP35790 457 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PUM3Q15397 648 aaKnown RBP4.01□□□□□ -1.77
SMC6-208ENST00000481708 PIK3R6Q5UE93 754 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 KRT77Q7Z794 578 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PPP1R35Q8TAP8 253 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 FAXDC2Q96IV6 333 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 MAN1C1Q9NR34 630 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 ATG3Q9NT62 314 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 BLOC1S4Q9NUP1 217 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 PRODHO43272 600 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 TBC1D8O95759 1140 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 SCLT1Q96NL6 688 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 RASSF4Q9H2L5 321 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 RRP7BPQ9NSQ0 103 aa4.01□□□□□ -1.77
SMC6-208ENST00000481708 J3KRW8 73 aa4□□□□□ -1.77
SMC6-208ENST00000481708 TNFRSF10CO14798 259 aa4□□□□□ -1.77
SMC6-208ENST00000481708 IMPDH2P12268 514 aa4□□□□□ -1.77
SMC6-208ENST00000481708 GPLD1P80108 840 aa4□□□□□ -1.77
SMC6-208ENST00000481708 NLRC3Q7RTR2 1065 aa4□□□□□ -1.77
SMC6-208ENST00000481708 FAM186BQ8IYM0 893 aa4□□□□□ -1.77
SMC6-208ENST00000481708 AARSD1Q9BTE6 412 aaKnown RBP4□□□□□ -1.77
SMC6-208ENST00000481708 PRDM6Q9NQX0 595 aa4□□□□□ -1.77
SMC6-208ENST00000481708 REV1Q9UBZ9 1251 aa4□□□□□ -1.77
SMC6-208ENST00000481708 GPN3Q9UHW5 284 aaPredicted RBP4□□□□□ -1.77
SMC6-208ENST00000481708 PNMA8BQ9ULN7 279 aaPredicted RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms