RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 PHF20L1A8MW92 1017 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 TEX28O15482 410 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 SLC26A4O43511 780 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 OXSR1O95747 527 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 VHLP40337 213 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 ME1P48163 572 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 RCN2Q14257 317 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 EAPPQ56P03 285 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 FAM133BQ5BKY9 247 aaKnown RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 Q6ZNX1 250 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 EIF1ADQ8N9N8 165 aaKnown RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 PIGOQ8TEQ8 1089 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 PPP1R12CQ9BZL4 782 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 SAMD15Q9P1V8 674 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 CHPF2Q9P2E5 772 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 WWC3Q9ULE0 1092 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 GPC6Q9Y625 555 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 A0A1B0GTH6 734 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 SPTLC1O15269 473 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 FBXO21O94952 628 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 ATP1A1P05023 1023 aaKnown RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 CCNB1P14635 433 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 IL4RP24394 825 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 HPDP32754 393 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 NDUFA8P51970 172 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 KIF23Q02241 960 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 ARL13BQ3SXY8 428 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 WASHC2DQ5SRD0 308 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 CROCCP3Q8IVE0 287 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 IFT20Q8IY31 132 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 THEMISQ8N1K5 641 aaPredicted RBP11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 POLD4Q9HCU8 107 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 TRPC7Q9HCX4 862 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 CABP2Q9NPB3 220 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 STOML1Q9UBI4 398 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 GTF3C4Q9UKN8 822 aa11.25□□□□□ -0.61
PRPF4B-206ENST00000481109 H3BQV1 296 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 ECE2O60344 883 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 UBOX5O94941 541 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PRLRP16471 622 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PSMA5P28066 241 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 SERPINB3P29508 390 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 HSPA9P38646 679 aaKnown RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 RELAQ04206 551 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 SHROOM1Q2M3G4 852 aaPredicted RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 UNC13DQ70J99 1090 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PASD1Q8IV76 773 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 BRF1Q92994 677 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 VPS50Q96JG6 964 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 NSRP1Q9H0G5 558 aaKnown RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 RSPH9Q9H1X1 276 aaPredicted RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 FKBP14Q9NWM8 211 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 SATB2Q9UPW6 733 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 ZMYM6O95789 1325 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PREX1Q8TCU6 1659 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 IFT172Q9UG01 1749 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 FAM25EA8MYX2 175 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PDE2AO00408 941 aaPredicted RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 SH3BP5O60239 455 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 ATP9AO75110 1047 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 HSPA1AP0DMV8 641 aaKnown RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 HSPA1BP0DMV9 641 aaKnown RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 TXKP42681 527 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 ACADSBP45954 432 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 E2F2Q14209 437 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PCNX4Q63HM2 1172 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 MARK2Q7KZI7 788 aaKnown RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PTF1AQ7RTS3 328 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 TREML1Q86YW5 311 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 EPSTI1Q96J88 318 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 GPR101Q96P66 508 aaPredicted RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 USP28Q96RU2 1077 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 LRRC1Q9BTT6 524 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 NDEL1Q9GZM8 345 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 CCDC134Q9H6E4 229 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 ZNF304Q9HCX3 659 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 DDX43Q9NXZ2 648 aaKnown RBP11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 PCDHA7Q9UN72 937 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 IKBKGQ9Y6K9 419 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 USH1CQ9Y6N9 552 aa11.24□□□□□ -0.61
PRPF4B-206ENST00000481109 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 E9PBE3 544 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 MAP3K7O43318 606 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 PDE5AO76074 875 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 SCG2P13521 617 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 CPA1P15085 419 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 TKTP29401 623 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 PBX1P40424 430 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 TMED10P49755 219 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 C2orf54Q08AI8 447 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 COBLL1Q53SF7 1204 aa11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 MEX3CQ5U5Q3 659 aaKnown RBP11.23□□□□□ -0.61
PRPF4B-206ENST00000481109 AGAP9Q5VTM2 703 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms