RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 POTEDQ86YR6 584 aa23.04■■□□□ 1.28
CTSA-206ENST00000480961 ETNPPLQ8TBG4 499 aa23.04■■□□□ 1.28
CTSA-206ENST00000480961 INTS4Q96HW7 963 aaKnown RBP23.04■■□□□ 1.28
CTSA-206ENST00000480961 TRMT13Q9NUP7 481 aaKnown RBP23.04■■□□□ 1.28
CTSA-206ENST00000480961 DCDC2CA8MYV0 355 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 H3BRB1 525 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 CHMP2AO43633 222 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 GAS7O60861 476 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 GCFC2P16383 781 aaKnown RBP23.03■■□□□ 1.28
CTSA-206ENST00000480961 U2AF2P26368 475 aaKnown RBP eCLIP23.03■■□□□ 1.28
CTSA-206ENST00000480961 MARK3P27448 753 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 FAAP100Q0VG06 881 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 GLG1Q92896 1179 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 PCYT2Q99447 389 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 TUT1Q9H6E5 874 aaKnown RBP23.03■■□□□ 1.28
CTSA-206ENST00000480961 MYH7BA7E2Y1 1941 aa23.03■■□□□ 1.28
CTSA-206ENST00000480961 TRIM43BA6NCK2 446 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 HAS3O00219 553 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 B4GALT4O60513 344 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 NBR1Q14596 966 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 ZNF174Q15697 407 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 FAM126BQ8IXS8 530 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 C7orf31Q8N865 590 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 TRIM43Q96BQ3 446 aaPredicted RBP23.02■■□□□ 1.28
CTSA-206ENST00000480961 RIT2Q99578 217 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 NAP1L4Q99733 375 aaKnown RBP23.02■■□□□ 1.28
CTSA-206ENST00000480961 TEKT3Q9BXF9 490 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 UNC45AQ9H3U1 944 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 PDLIM7Q9NR12 457 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 TMEM39AQ9NV64 488 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 HDAC6Q9UBN7 1215 aa23.02■■□□□ 1.28
CTSA-206ENST00000480961 VPS37CA5D8V6 355 aaPredicted RBP23.01■■□□□ 1.27
CTSA-206ENST00000480961 MARCH6O60337 910 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 PSMD10O75832 226 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 CLTBP09497 229 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 MCM7P33993 719 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 NFRKBQ6P4R8 1299 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 ABHD15Q6UXT9 468 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 HAS1Q92839 578 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 TOX2Q96NM4 488 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 KATNAL1Q9BW62 490 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 RNPEPQ9H4A4 650 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 KCNMB3Q9NPA1 279 aa23.01■■□□□ 1.27
CTSA-206ENST00000480961 BACH1O14867 736 aa23■■□□□ 1.27
CTSA-206ENST00000480961 ATG7O95352 703 aa23■■□□□ 1.27
CTSA-206ENST00000480961 HSP90AA1P07900 732 aaKnown RBP23■■□□□ 1.27
CTSA-206ENST00000480961 SUPT20HL2P0C7V6 817 aa23■■□□□ 1.27
CTSA-206ENST00000480961 ZNF200P98182 395 aaPredicted RBP23■■□□□ 1.27
CTSA-206ENST00000480961 KRT76Q01546 638 aa23■■□□□ 1.27
CTSA-206ENST00000480961 HIC1Q14526 733 aa23■■□□□ 1.27
CTSA-206ENST00000480961 GDF6Q6KF10 455 aaPredicted RBP23■■□□□ 1.27
CTSA-206ENST00000480961 ZNF746Q6NUN9 644 aaPredicted RBP23■■□□□ 1.27
CTSA-206ENST00000480961 SWSAP1Q6NVH7 229 aa23■■□□□ 1.27
CTSA-206ENST00000480961 TCEAL9Q9UHQ7 104 aa23■■□□□ 1.27
CTSA-206ENST00000480961 SAMM50Q9Y512 469 aa23■■□□□ 1.27
CTSA-206ENST00000480961 MROH7Q68CQ1 1323 aa23■■□□□ 1.27
CTSA-206ENST00000480961 TLR3O15455 904 aaKnown RBP22.99■■□□□ 1.27
CTSA-206ENST00000480961 LGR5O75473 907 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 CD4P01730 458 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 CYP2C9P11712 490 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 SYT1P21579 422 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 TOB1P50616 345 aaPredicted RBP22.99■■□□□ 1.27
CTSA-206ENST00000480961 TTC38Q5R3I4 469 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 MIS18BP1Q6P0N0 1132 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 FERMT3Q86UX7 667 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 TMEM60Q9H2L4 133 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 SMARCAD1Q9H4L7 1026 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 AZI2Q9H6S1 392 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 ZNF215Q9UL58 517 aaPredicted RBP22.99■■□□□ 1.27
CTSA-206ENST00000480961 PDE4DIPQ5VU43 2346 aa22.99■■□□□ 1.27
CTSA-206ENST00000480961 DOCK5Q9H7D0 1870 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 NEMFO60524 1076 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 SMIM10L2AP0DMW4 78 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 SMIM10L2BP0DMW5 78 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 PDCP20941 246 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 STAT5BP51692 787 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 CALCRLQ16602 461 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 CCDC60Q8IWA6 550 aaPredicted RBP22.98■■□□□ 1.27
CTSA-206ENST00000480961 FAM20AQ96MK3 541 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 DISC1Q9NRI5 854 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 SETD4Q9NVD3 440 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 PRKAG2Q9UGJ0 569 aa22.98■■□□□ 1.27
CTSA-206ENST00000480961 NOL7Q9UMY1 257 aaKnown RBP22.98■■□□□ 1.27
CTSA-206ENST00000480961 ITGB8P26012 769 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 PTPN11Q06124 597 aaPredicted RBP22.97■■□□□ 1.27
CTSA-206ENST00000480961 PTGISQ16647 500 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 TRMT1LQ7Z2T5 733 aaKnown RBP22.97■■□□□ 1.27
CTSA-206ENST00000480961 SEZ6LQ9BYH1 1024 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 ZNF302Q9NR11 478 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 ERAP1Q9NZ08 941 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 GTF2IRD1Q9UHL9 959 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 VAV3Q9UKW4 847 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 PCDHA10Q9Y5I2 948 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 CEP290O15078 2479 aa22.97■■□□□ 1.27
CTSA-206ENST00000480961 ALPK3Q96L96 1907 aa22.96■■□□□ 1.27
CTSA-206ENST00000480961 IGKV6D-21A0A0A0MT36 114 aa22.96■■□□□ 1.27
CTSA-206ENST00000480961 WDR64B1ANS9 1081 aa22.96■■□□□ 1.27
CTSA-206ENST00000480961 EML1O00423 815 aa22.96■■□□□ 1.27
CTSA-206ENST00000480961 BAG4O95429 457 aaKnown RBP22.96■■□□□ 1.27
CTSA-206ENST00000480961 PSAPP07602 524 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms