RNA–Protein interactions for RNA: ENST00000478638.5

ATG7-223, Transcript of autophagy related 7, human

TSL 5

Gene ATG7, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATG7-223	ENST00000478638	RPA1	P27694	616 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	GCLC	P48506	637 aa	Predicted RBP	10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	HERVK_113	P62684	666 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	ASIC1	P78348	528 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	PDE4D	Q08499	809 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	KCNJ12	Q14500	433 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	MCM6	Q14566	821 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	FILIP1L	Q4L180	1135 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	ZCWPW2	Q504Y3	356 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	REXO1L1P	Q8IX06	675 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	PPP1R13B	Q96KQ4	1090 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	POLR3C	Q9BUI4	534 aa	Predicted RBP	10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	R3HDML	Q9H3Y0	253 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	MAP3K20	Q9NYL2	800 aa	Known RBP	10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	PNMA2	Q9UL42	364 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	MRPL11	Q9Y3B7	192 aa	Known RBP	10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	RABGAP1	Q9Y3P9	1069 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	PCDHA2	Q9Y5H9	948 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	LOC285556	D6RIA3	1793 aa		10.66	□□□□□ -0.7
ATG7-223	ENST00000478638	ZNF536	O15090	1300 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SPDYE3	A6NKU9	549 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	AKR1B15	C9JRZ8	316 aa	Predicted RBP	10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	FKTN	O75072	461 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	MFAP3L	O75121	409 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	ZBED4	O75132	1171 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	GYPC	P04921	128 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SPATA31C1	P0DKV0	1188 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	FDX1	P10109	184 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	HSPA8	P11142	646 aa	Known RBP	10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	DSG3	P32926	999 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	HSD17B4	P51659	736 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	LBX1	P52954	281 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SP3	Q02447	781 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	LRRC63	Q05C16	580 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	KIF22	Q14807	665 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	ARHGEF6	Q15052	776 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SYCP1	Q15431	976 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	FIGN	Q5HY92	759 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	HAUS3	Q68CZ6	603 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	C17orf99	Q6UX52	265 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	ANKRD13C	Q8N6S4	541 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	PRPF38A	Q8NAV1	312 aa	Known RBP	10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	ANKRD20A12P	Q8NF67	263 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	RASSF8	Q8NHQ8	419 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	DDX12P	Q92771	950 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SLC5A5	Q92911	643 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	KIFC2	Q96AC6	838 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	PLIN2	Q99541	437 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SLF1	Q9BQI6	1058 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	PAGR1	Q9BTK6	254 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	MAF1	Q9H063	256 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	SEMA6B	Q9H3T3	888 aa		10.65	□□□□□ -0.7
ATG7-223	ENST00000478638	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.65	□□□□□ -0.7	5e-7	■■■■□ 25.2
ATG7-223	ENST00000478638	UQCRHL	A0A096LP55	91 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	TRIM49B	A6NDI0	452 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	GOLGA6L9	A6NEM1	432 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	MSH4	O15457	936 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	PSMD10	O75832	226 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	ICAM1	P05362	532 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	UQCRH	P07919	91 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	POLR2M	P0CAP2	368 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	BCR	P11274	1271 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	FCER1A	P12319	257 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	CYP11B2	P19099	503 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	SLC12A3	P55017	1021 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	PPP2R5C	Q13362	524 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	PTPN14	Q15678	1187 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	TPD52L1	Q16890	204 aa	Predicted RBP	10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	ANKRD40	Q6AI12	368 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	TRIM65	Q6PJ69	517 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	LRRC55	Q6ZSA7	311 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	NIPA1	Q7RTP0	329 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	CNGA4	Q8IV77	575 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	FAM114A1	Q8IWE2	563 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	MB21D1	Q8N884	522 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	GPRC5A	Q8NFJ5	357 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	IQCD	Q96DY2	449 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	CDK5RAP3	Q96JB5	506 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	C16orf45	Q96MC5	204 aa	Predicted RBP	10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	ERGIC2	Q96RQ1	377 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	BAG1	Q99933	345 aa	Predicted RBP	10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	TTYH3	Q9C0H2	523 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	L2HGDH	Q9H9P8	463 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	FBXO28	Q9NVF7	368 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	PPP1R9A	Q9ULJ8	1098 aa		10.64	□□□□□ -0.71
ATG7-223	ENST00000478638	MYPN	Q86TC9	1320 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	MEIS1	O00470	390 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	N4BP3	O15049	544 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	MED24	O75448	989 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	PLA2G4B	P0C869	781 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	CCT6A	P40227	531 aa	Known RBP	10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	DNM2	P50570	870 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	MARS	P56192	900 aa	Known RBP	10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	SNAP25	P60880	206 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	CCNA1	P78396	465 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	RBL2	Q08999	1139 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	COASY	Q13057	564 aa		10.63	□□□□□ -0.71
ATG7-223	ENST00000478638	PLS1	Q14651	629 aa		10.63	□□□□□ -0.71

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