RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 PTGDRQ13258 359 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 RILPL1Q5EBL4 403 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 B3GNT9Q6UX72 402 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 BRAPQ7Z569 592 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 C16orf70Q9BSU1 422 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 TBC1D22BQ9NU19 505 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 TFIP11Q9UBB9 837 aaKnown RBP17.95■□□□□ 0.46
COPS3-207ENST00000477299 VAV3Q9UKW4 847 aa17.95■□□□□ 0.46
COPS3-207ENST00000477299 NOP56O00567 594 aaKnown RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 GAS7O60861 476 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 TCF7P36402 384 aaPredicted RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 CPT1AP50416 773 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 ATN1P54259 1190 aaPredicted RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 ABHD15Q6UXT9 468 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 ANKLE1Q8NAG6 615 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 GIMAP8Q8ND71 665 aaPredicted RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 RIT2Q99578 217 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 NAP1L4Q99733 375 aaKnown RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 TSEN34Q9BSV6 310 aaKnown RBP17.94■□□□□ 0.46
COPS3-207ENST00000477299 TEKT3Q9BXF9 490 aa17.94■□□□□ 0.46
COPS3-207ENST00000477299 MARCH6O60337 910 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 PPFIA4O75335 1185 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 ATG7O95352 703 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 LGALS2P05162 132 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 SPIRE1Q08AE8 756 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 SF3A1Q15459 793 aaKnown RBP17.93■□□□□ 0.46
COPS3-207ENST00000477299 DGKDQ16760 1214 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 PCSK9Q8NBP7 692 aaKnown RBP17.93■□□□□ 0.46
COPS3-207ENST00000477299 SEPT1Q8WYJ6 367 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 FAM20AQ96MK3 541 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 USP28Q96RU2 1077 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 C11orf49Q9H6J7 331 aa17.93■□□□□ 0.46
COPS3-207ENST00000477299 DNAH12Q6ZR08 3092 aa17.92■□□□□ 0.46
COPS3-207ENST00000477299 TBX3O15119 743 aa17.92■□□□□ 0.46
COPS3-207ENST00000477299 HIC1Q14526 733 aa17.92■□□□□ 0.46
COPS3-207ENST00000477299 SWSAP1Q6NVH7 229 aa17.92■□□□□ 0.46
COPS3-207ENST00000477299 CCDC60Q8IWA6 550 aaPredicted RBP17.92■□□□□ 0.46
COPS3-207ENST00000477299 VTI1AQ96AJ9 217 aa17.92■□□□□ 0.46
COPS3-207ENST00000477299 MTG1Q9BT17 334 aaPredicted RBP17.92■□□□□ 0.46
COPS3-207ENST00000477299 ZSCAN16Q9H4T2 348 aaPredicted RBP17.92■□□□□ 0.46
COPS3-207ENST00000477299 TTC12Q9H892 705 aaPredicted RBP17.92■□□□□ 0.46
COPS3-207ENST00000477299 ELP1O95163 1332 aa17.92■□□□□ 0.46
COPS3-207ENST00000477299 MKI67P46013 3256 aaKnown RBP17.92■□□□□ 0.46
COPS3-207ENST00000477299 MOXD2PA6NHM9 499 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 POTEMA6NI47 508 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 TNRC18O15417 2968 aaPredicted RBP17.91■□□□□ 0.46
COPS3-207ENST00000477299 OR52Z1P0C646 297 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 SUPT20HL2P0C7V6 817 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 ATP4AP20648 1035 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 TECP42680 631 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 PSEN2P49810 448 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 GRIN1Q05586 938 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 PTPAQ15257 358 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 UGCGQ16739 394 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 LRRC26Q2I0M4 334 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 NBPF20Q3BBV1 942 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 ZNF746Q6NUN9 644 aaPredicted RBP17.91■□□□□ 0.46
COPS3-207ENST00000477299 SLC39A5Q6ZMH5 540 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 NECAB2Q7Z6G3 386 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 RNPEPQ9H4A4 650 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 DISC1Q9NRI5 854 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 POLR3EQ9NVU0 708 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 PCDHA12Q9UN75 941 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 EVPLQ92817 2033 aa17.91■□□□□ 0.46
COPS3-207ENST00000477299 A0A087WWV3 80 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 IGKV6D-21A0A0A0MT36 114 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 HAS3O00219 553 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 ZEB2O60315 1214 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 LGR5O75473 907 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
COPS3-207ENST00000477299 MARK3P27448 753 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 ATP2C1P98194 919 aaPredicted RBP17.9■□□□□ 0.46
COPS3-207ENST00000477299 KRT76Q01546 638 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 PPP2R5CQ13362 524 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 BRDTQ58F21 947 aaPredicted RBP17.9■□□□□ 0.46
COPS3-207ENST00000477299 NCAPH2Q6IBW4 605 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 TRMT1LQ7Z2T5 733 aaKnown RBP17.9■□□□□ 0.46
COPS3-207ENST00000477299 MIER3Q7Z3K6 550 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 SLFN12Q8IYM2 578 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 STARD7Q9NQZ5 370 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 RGL1Q9NZL6 768 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 SAMM50Q9Y512 469 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 PCDHA10Q9Y5I2 948 aa17.9■□□□□ 0.46
COPS3-207ENST00000477299 PP2D1A8MPX8 630 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 H3BRB1 525 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 MARCKSP29966 332 aaPredicted RBP17.89■□□□□ 0.45
COPS3-207ENST00000477299 DNM1Q05193 864 aaKnown RBP17.89■□□□□ 0.45
COPS3-207ENST00000477299 ORC2Q13416 577 aaPredicted RBP17.89■□□□□ 0.45
COPS3-207ENST00000477299 ITGA7Q13683 1181 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 MFSD10Q14728 455 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 KIAA0753Q2KHM9 967 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 BANK1Q8NDB2 785 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 GLT1D1Q96MS3 346 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 TUT1Q9H6E5 874 aaKnown RBP17.89■□□□□ 0.45
COPS3-207ENST00000477299 WRAP73Q9P2S5 460 aaPredicted RBP17.89■□□□□ 0.45
COPS3-207ENST00000477299 GABBR1Q9UBS5 961 aa17.89■□□□□ 0.45
COPS3-207ENST00000477299 BACH1O14867 736 aa17.88■□□□□ 0.45
COPS3-207ENST00000477299 ZNF862O60290 1169 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms