RNA–Protein interactions for RNA: ENST00000475403.2

LSAMP-204, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-204ENST00000475403 HMMRO75330 724 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 RGS20O76081 388 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 NASPP49321 788 aaPredicted RBP7.9□□□□□ -1.14
LSAMP-204ENST00000475403 LAMC2Q13753 1193 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 STXBP2Q15833 593 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 USH1GQ495M9 461 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 SERINC5Q86VE9 423 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 MICAL1Q8TDZ2 1067 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 APPBP2Q92624 585 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 PRIMPOLQ96LW4 560 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 NEK1Q96PY6 1258 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 EPB41L4AQ9HCS5 686 aaPredicted RBP7.9□□□□□ -1.14
LSAMP-204ENST00000475403 GPCPD1Q9NPB8 672 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 FAM13BQ9NYF5 915 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 CLEC1BQ9P126 229 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 ZKSCAN5Q9Y2L8 839 aa7.9□□□□□ -1.14
LSAMP-204ENST00000475403 CCDC171Q6TFL3 1326 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 SORBS3O60504 671 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 RANBP6O60518 1105 aaKnown RBP7.89□□□□□ -1.15
LSAMP-204ENST00000475403 NMT2O60551 498 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 ATF7P17544 494 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-204ENST00000475403 KCNA4P22459 653 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 HMGN5P82970 282 aaKnown RBP7.89□□□□□ -1.15
LSAMP-204ENST00000475403 PPARAQ07869 468 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 C20orf194Q5TEA3 1177 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 ARHGEF16Q5VV41 709 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 TTBK2Q6IQ55 1244 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 CCDC62Q6P9F0 684 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 ADGRD2Q7Z7M1 963 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 SKAP1Q86WV1 359 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 HSCBQ8IWL3 235 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 UBALD2Q8IYN6 164 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 TMEM105Q8N8V8 129 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 KREMEN2Q8NCW0 462 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 MYRIPQ8NFW9 859 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 NSUN6Q8TEA1 469 aaKnown RBP7.89□□□□□ -1.15
LSAMP-204ENST00000475403 CLEC4DQ8WXI8 215 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 CLP1Q92989 425 aaKnown RBP7.89□□□□□ -1.15
LSAMP-204ENST00000475403 EMID1Q96A84 441 aaPredicted RBP7.89□□□□□ -1.15
LSAMP-204ENST00000475403 RMDN1Q96DB5 314 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 SPATA33Q96N06 139 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 TLE6Q9H808 572 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 TOMM22Q9NS69 142 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 TMEM51Q9NW97 253 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 PLAGL2Q9UPG8 496 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 NR2E1Q9Y466 385 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 KIAA1217Q5T5P2 1943 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 CACNA1GO43497 2377 aa7.89□□□□□ -1.15
LSAMP-204ENST00000475403 GVINP1Q7Z2Y8 2422 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 HAS3O00219 553 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 RAB11FIP3O75154 756 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 GNAT1P11488 350 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 EIF2AK2P19525 551 aaKnown RBP7.88□□□□□ -1.15
LSAMP-204ENST00000475403 FAM193AP78312 1265 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 KLHL40Q2TBA0 621 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 NAALADL2Q58DX5 795 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 ASTLQ6HA08 431 aaPredicted RBP7.88□□□□□ -1.15
LSAMP-204ENST00000475403 KIAA2013Q8IYS2 634 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 POF1BQ8WVV4 589 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 P2RX5Q93086 422 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 OSBP2Q969R2 916 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 CNTNAP3BQ96NU0 1288 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 CNTNAP3Q9BZ76 1288 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 DDX41Q9UJV9 622 aaKnown RBP7.88□□□□□ -1.15
LSAMP-204ENST00000475403 R3HCC1Q9Y3T6 440 aaKnown RBP7.88□□□□□ -1.15
LSAMP-204ENST00000475403 MYH7BA7E2Y1 1941 aa7.88□□□□□ -1.15
LSAMP-204ENST00000475403 WDR19Q8NEZ3 1342 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 PATL2C9JE40 543 aaKnown RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 GOLGA6L22H0YM25 854 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 M0R2C6 588 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 NOP56O00567 594 aaKnown RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 RNF113AO15541 343 aaKnown RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 TREHO43280 583 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 PPFIA3O75145 1194 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 GLP2RO95838 553 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 ITGB1P05556 798 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 ZFYP08048 801 aaPredicted RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 SMIM10L2AP0DMW4 78 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 SMIM10L2BP0DMW5 78 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 GHRP10912 638 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 PUM1Q14671 1186 aaKnown RBP eCLIP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 PAN2Q504Q3 1202 aaKnown RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 SPOUT1Q5T280 376 aaKnown RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 BTNL9Q6UXG8 535 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 GAS2L3Q86XJ1 694 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 MCF2L2Q86YR7 1114 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 CREBRFQ8IUR6 639 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 KLHL23Q8NBE8 558 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 FLCNQ8NFG4 579 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 GPATCH3Q96I76 525 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 IWS1Q96ST2 819 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 RMDN3Q96TC7 470 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 CDCA3Q99618 268 aaPredicted RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 APOL5Q9BWW9 433 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 GZF1Q9H116 711 aaPredicted RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 CCDC39Q9UFE4 941 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 SORCS3Q9UPU3 1222 aa7.87□□□□□ -1.15
LSAMP-204ENST00000475403 MRPL42Q9Y6G3 142 aaKnown RBP7.87□□□□□ -1.15
LSAMP-204ENST00000475403 DNAH14Q0VDD8 3507 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms